| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1543 |
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| Symbol | |
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| ID | 4252121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1820998 |
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| End bp | 1822824 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638118151 |
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| Product | hypothetical protein |
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| Protein accession | YP_733678 |
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| Protein GI | 113969885 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0643256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAA AGTTGGATAA AGCCCTGTCC TTGGTTGCCT TAGGTGTCCT TGGCGTATTA
CACAGTGCCC ATGCTGCACC CGTCTATGAG ATTGTCAACC TTGATAATTA TGATCTGCAA
GGCTCTCTGG AAGGCACCCG TAATGGTTAT GCGTTGGGTG TTAACGCCAA CGATGAGTTG
GTTGGTATAG CTAAAGGTAA GAAAAAACTC AGCACATCTG ACGTGGAAGG TGGAATTATC
GACGTCGAAG ATGGTATCGC CCCTGAGGAA ACCATTACTT ATTCTATTAC TGAAGCCATT
GTTGCTAATA ACTTTGCCTT TATCGCTGCG CAAAATGGTG CCGCTGGCGC ATGGTTACCG
ACCTTTGACA GTATCAATGG CACTACGCCA CCGAGTGATA TTTCGGTTGT CAACTCAGTC
GATACTTTTT ATTACGGCAT CAACGATGCG GGCGTGAAAG TGGGCAGTAT GACTGCCCCT
GAAAAGAAAA CAGAAAATAC TGCGACCACA GATAATGCAA CCGACTACTG GTATTACCGT
GATTATGAAT ATCGCGGTTT TGCCAAAGTA GGGGATAGCG AAATCCCATT ACCGCCGCCT
TACACCCAGT ATGTTAAAGA GGATAAAACT GTTGAGTTAG GCGGTTGGTC TGCGGCGACG
GCGATTAACA ATAATAATTT AGTTGTTGGT TATGCTAGCA CCGATATCAG TAACTATGCG
GCTGATCGTG TTGCTTACTG TTTAGGTACT GATAACACGT TACCATTAGA TGTGTGTATA
CAGCGCGAGC AATATCCGAA TGCTCAAGGT ACCCGTAATA TTCAATACCA AACCCGTGCC
TATGTATGGC AACTGGATAA TGGCGTTGCA ACGGGCACAG CTTTACCGCT TGGATTAACT
CCTGCCACCG ATAATAAGCT TACGTTTACC GCCCAAGCTC TGGGGGTGAA TAATGAGGGG
GTAGTCGCGG GACGTTCGCA TGTTTACCGT AATGGTAGTA CAGATAGATT ACGCCAAGAT
GCTGCCTATT GGAGTAAAGA TGCTGAGGGC AACTATCAAT ACCATTGGAT CCCAATGGGC
GAGTCCATTT CAAGCTCAAT TGCCTATGAT GTAAACGATA GCGGTATTCT TGTTGGTAGT
TATCGCAGTT ATATCCAAGG TTATCCGCGT GATAAGTTCT TCTACTTTGA TATCAATACG
CCAGATAAAC CTTATGTCAC CCCCAATGAT TTTGCTGCGA CGACAACGGA TCTGTCCAGT
AAACCAAAAG ATATCAATAA TAAAGGCCAA GTTGTTGGTT ATATTGAAAC TACCTATGAT
AAGGAAAAAC CACGGCCTAA GGCGGGTTTC CTGTATGAGA AGTCTACTGG GGAGTTCAGT
AACCTCAATA ACTTGCTGAC CTGTGAATCC AAGGGCTTTG AAAAGGGCGC TGATGGTAAT
TGGACCCGTC ATCAGGTTGA GGTGCAGGAC GGTACTGGCA AAGTACTGAC TTATAATAGC
GATATTCTCG TTGTTGAAGC GACCAGCATT AATGAAGATG GCACCATAGT GGGAACTGCC
TTTATTCGTA AACCTTCATA TCAGTTCGAT TTGAAAGGTA ATGTTATTGT CGGTGAAAAT
GGCCTGCCCC TGTTTGAACT TAGCGGTAAT GGTGACCCAG TTACGGCCTA TGTTCCGCGT
ATGGTCGTGT TAAAACCGAC CACTAATGGT GAAGCTTGTA CTGTCGATGA CAGCACTGAC
ACTGGTAATT ACGAACGTAA AGGCGCTGCT TCTCTCGCTT GGTTATTGGC CTTACCTTTA
GTCTGGTTAC GTCGCCGCGT TCGCTAA
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| Protein sequence | MKSKLDKALS LVALGVLGVL HSAHAAPVYE IVNLDNYDLQ GSLEGTRNGY ALGVNANDEL
VGIAKGKKKL STSDVEGGII DVEDGIAPEE TITYSITEAI VANNFAFIAA QNGAAGAWLP
TFDSINGTTP PSDISVVNSV DTFYYGINDA GVKVGSMTAP EKKTENTATT DNATDYWYYR
DYEYRGFAKV GDSEIPLPPP YTQYVKEDKT VELGGWSAAT AINNNNLVVG YASTDISNYA
ADRVAYCLGT DNTLPLDVCI QREQYPNAQG TRNIQYQTRA YVWQLDNGVA TGTALPLGLT
PATDNKLTFT AQALGVNNEG VVAGRSHVYR NGSTDRLRQD AAYWSKDAEG NYQYHWIPMG
ESISSSIAYD VNDSGILVGS YRSYIQGYPR DKFFYFDINT PDKPYVTPND FAATTTDLSS
KPKDINNKGQ VVGYIETTYD KEKPRPKAGF LYEKSTGEFS NLNNLLTCES KGFEKGADGN
WTRHQVEVQD GTGKVLTYNS DILVVEATSI NEDGTIVGTA FIRKPSYQFD LKGNVIVGEN
GLPLFELSGN GDPVTAYVPR MVVLKPTTNG EACTVDDSTD TGNYERKGAA SLAWLLALPL
VWLRRRVR
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