| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1525 |
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| Symbol | |
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| ID | 4252103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1800402 |
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| End bp | 1802549 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118129 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_733660 |
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| Protein GI | 113969867 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGT CTGTTATTAC TACTGCCGTG GCCGCGGCAT TGTTATTGGG CGCTTGCTCA
GAAAAACCGG CAGCCAATAC TGAGGCCGCC AATGCGGTCG CGACGCAAGC TGCTGCATCG
ACTCAAGCTG ATGCGACCAA TGTGTTATTG AGTAAGAGTC CACTGCAGGA TCAAGCTCCG
CAGTTTAATC TGATCAAGAG TTCGGATTAT GCCCCCGCGT TTGCGCAGGG CATAAAAGAA
CATGAGGCTG AAATTGCCGC CATTATTGCC AATAAACAGG CGCCAACCTT CGAGAATACG
ATTTTAGCCA TGGAAACCTC GGGTGAGTTG TTAACTCGAG TGTCACGTAC CTTCTTCAAT
CTGGCGGGGT TAATCTCCGA CGATGATTTT CAAAAAAACG AGGCGGACTT AGCGCCTAAG
CTGTCGGCTC ACCGCGATAA CATCTACTTA GATCCAAGTT TATTTGCCCG TGTAGAAACC
GTATATCAAC AACGTGCAGG GTTAAATGCC GAAGATAAGC GCTTGGTCGA GTTTTATTAC
GAGCAGTTTG TACGTGCTGG GGCCAAATTA TCCGATGCCG ATAAAGCCAA GATGCGCGAC
TTTAACGCTG AGTTAGCGAC CCTAGCGACT GAGTTTTCTC AAAACAGCTT AAAGTCATTT
AAAGACGATG TGATTGTTGT GACCGACAAA GCACAACTGG ACGGTTTATC TGACAGCGAA
ATCGCGACCT TAGCGGCCGC AGCGCAGGCG GCTGGTAAAA CGGGTTACCT GATTACCTTA
GTGAACACGA CTCGTCAGCC TATTTTAGCC AGTTTAAATA ACCGTGAACT GCGCCAAAAA
GTCTGGGAAA CCTCGGCTCA CCGCGCTGTT GCCAGCAATG GTCCTTTAAT CGTGAAGATG
GCGCAGCTGC GCGCTAAGAA AGCCAATTTA CTCGGCTTTG ATACTTGGGC AGCCTACGCC
GTGGCCGACC AAATGGCTAA AACGCCAAGC GCCGTGTATG AAATTTTAGA TGACTTGGCG
CCTAAAGCGC TGGCTCACGC TAAGGCCGAT GCGGCGGATA TCCAAGCTGA AATCAAAAAG
GCCGGCGGTA ATTTTGAATT ACAACCTTGG GATTGGGCTT ATTACGCCGA GAAAGTGCGT
CAGCAAAAAT ACGCCCTCGA TGAGAGCAGC ATCAAACCCT ACTTTGAGTT TAACTCTGTG
CTGAAGGATG GTTTGTTCTT CGCGATGCAC AAACTCTACG GCATCAGCGT TAAACCGCGC
ACCGATTTAC CAGTATGGAA TAGCGATGTC CTCGCCTTTG AGGTTTTCGA TAAAGACAAC
AGCTCTATTG GTCTGTTCTA TCTTGACCCT TATGCCCGTG AAGGTAAGGG CGGCGGCGCT
TGGATGGATG AGTTTGTCAC TCAAAGCGGC CTGCTAGGCA CTAAGCCTGT GGTGTATAAC
GCACTGAATA TCCCGAAACC TGCCGACGGT CCAACCTTGA TGACCTTCGA TGAAGTGACC
ACTATGTTCC ATGAATTTGG TCATGCGGTG CACGGTTTAT TCTCCAAGGT GAAATACCCG
AGTGTGGCAG GTACCTCTAC AGCGCGCGAC TTTGTGGAGT TTCCGTCTCA AGTTAACGAA
GATTGGAACA TTGACCCTGC GGTCATTGCC AATTACGCCA AGCACTACCA AACTGGTGAG
CCTATTCCTA AAGCCTTACT CGATAAAATC TTAGCTTCGA ATAAATTTGG TCAAGGTTTT
GATACTGTTG AGTATTTAGC GGCTGCATTA CTGGATATGG AATGGCACTC GATTGGTGCC
GACACCCAAA TCAAAGATGT GGAACAGTTT GAGCATCAAG TGTTAGCCAA ACACGGCCTC
GATTTCGCGC CAATTCCACC GCGTTATAAG TCGAGCTATT TTAGCCATGC CTTCTCGGGT
GGCTATTCTG CAGGTTATTA CGCTTATCTG TGGACGGAAG TATTTGCCGC CGATGCCTTT
GCCTATATGG GCCAACATGG TGGTTTAAAA GCCGAAAACG GCGATAAGTT CCGTGATGCG
GTATTGTCTA AAGGCAACAG CGAAGATCTG ATGCAGGATT ACATCCACTT TACCGGTCAA
AAACCCACGA CCGATGCCTT ATTAAAGCGC CGTGGTTTAG TCGATTAA
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| Protein sequence | MRKSVITTAV AAALLLGACS EKPAANTEAA NAVATQAAAS TQADATNVLL SKSPLQDQAP
QFNLIKSSDY APAFAQGIKE HEAEIAAIIA NKQAPTFENT ILAMETSGEL LTRVSRTFFN
LAGLISDDDF QKNEADLAPK LSAHRDNIYL DPSLFARVET VYQQRAGLNA EDKRLVEFYY
EQFVRAGAKL SDADKAKMRD FNAELATLAT EFSQNSLKSF KDDVIVVTDK AQLDGLSDSE
IATLAAAAQA AGKTGYLITL VNTTRQPILA SLNNRELRQK VWETSAHRAV ASNGPLIVKM
AQLRAKKANL LGFDTWAAYA VADQMAKTPS AVYEILDDLA PKALAHAKAD AADIQAEIKK
AGGNFELQPW DWAYYAEKVR QQKYALDESS IKPYFEFNSV LKDGLFFAMH KLYGISVKPR
TDLPVWNSDV LAFEVFDKDN SSIGLFYLDP YAREGKGGGA WMDEFVTQSG LLGTKPVVYN
ALNIPKPADG PTLMTFDEVT TMFHEFGHAV HGLFSKVKYP SVAGTSTARD FVEFPSQVNE
DWNIDPAVIA NYAKHYQTGE PIPKALLDKI LASNKFGQGF DTVEYLAAAL LDMEWHSIGA
DTQIKDVEQF EHQVLAKHGL DFAPIPPRYK SSYFSHAFSG GYSAGYYAYL WTEVFAADAF
AYMGQHGGLK AENGDKFRDA VLSKGNSEDL MQDYIHFTGQ KPTTDALLKR RGLVD
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