Gene Shewmr4_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1519 
Symbol 
ID4252097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1787129 
End bp1787728 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content49% 
IMG OID638118118 
Producthypothetical protein 
Protein accessionYP_733654 
Protein GI113969861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000380714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0491707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAC CGTTACTTTG GCTTGGCAGT GCAGCAATGG GCGCGTTATT GCTCGCCGAT 
GAGCGTGAAA AGCGTCAACA GCTTGAGCGT GACCGCCTAT TAGGCAGAGC GCCACGGCAA
GCGAGTGCCA ACCAAGCCAT GGTTGCAGCA CCCAGCCAGT GGCAGAAGGG CTTTAAACAA
GTCTCGCCGC AGCCTGGAAG CATTGTTTGC TGCTATGTGT TTGGGGTCAT TGAACATACT
GGCATTTGGT TGGCGGATGA TTGCCTTATC GAGCTACATG GCTCAGGGCT GATAAGGGCG
GTATCGGTAA AACGGTTTCT AGCGGGGCGT ACTGGTAGCC AAATCTATAT TGCCTGCAAT
CATCAACATC AACCACTGAT TGCCAGTGAT ATGGTGAGCC GTGCCGAGCG GGCCATTTAT
CAATACCGTG AATATGATTT GTTCGACAAC AACTGCCATC GATTCGTCTG GTCATGTTTG
TGTGGTGAAG AGGTTGCCAT AAAAAGCTTT AATGAATTAA ATCAAAAACT CGCGGGCTAT
TTTAAGCAGG GGATTTACTG GGATGAAATG CGTCGAGTCC CTGAAGAGAT AAAAATGTAA
 
Protein sequence
MPLPLLWLGS AAMGALLLAD EREKRQQLER DRLLGRAPRQ ASANQAMVAA PSQWQKGFKQ 
VSPQPGSIVC CYVFGVIEHT GIWLADDCLI ELHGSGLIRA VSVKRFLAGR TGSQIYIACN
HQHQPLIASD MVSRAERAIY QYREYDLFDN NCHRFVWSCL CGEEVAIKSF NELNQKLAGY
FKQGIYWDEM RRVPEEIKM