| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1451 |
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| Symbol | |
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| ID | 4252029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1697006 |
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| End bp | 1699219 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118050 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_733586 |
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| Protein GI | 113969793 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTA AGATCATTAT TATGAAAACC TTCCCCCTCA ACCGTCTCAC GGCGCACTGC
CAACTCGCCA TCACACGCCC TGAGCTTATT CTCTGCAGTG CCATACTCAG CATGCCCTAT
GCTTATGCCG ATGCCAGCGA TACCCAGAAA AAATCCACCA AAGACATTGA AATCATTAAT
GTCGTTGGCG CTAAGGATCT CCATGATAAT CGCTACAAAA CTCAGGCGAT GAACACGGCA
ACGGGTCTAG ATTTGTCCTA TTTAGAGACG CCGCAATCCG TCACCTCTGT TACCAGCCAA
ATGATGCATG ACCAACAACT CAACAGCGTC ATCGAAGCCA TGACCAGCGT GGCTGGCATC
AATGCTCGGC CAATGGACAA CGACAGATAC AGCATCAGCT CGCGCGGAAT TGCGGTCACT
AGCATTCTTT ACGATGGCGT GCCTACCACC TATGACACCC GTTTTAACTA CGGCGATAAC
CTTATCGATA CCGCCATCTA CGAGCGCGTG GAAATTGTCC GTGGCGCCAC AGGGTTAATG
ACAGGTGCGG GTAACCCTTC GGCCGCGATT AACCTTATTC GTAAACGCCC AACGCAAGAA
TTTATGGGCA GCACCTCTGT GAGTGTCGGC TCATGGAACA ATCTGCGCGG TATGGTCGAT
TTATCCAGCG GTTTAAATGA CAGTGGCAGC ATTCGTGGCC GGGTTGTCGC CGCCTATCAG
GATAAAGAAT CCTTCCAAGA CAGATACGAG CAACAACGCA CCACCCTCTA TGGCATTTTT
GAAACCGATA TTACCGACAG CACACTGCTG ACCTTAGGCG TAGATTATCA AGACACCACG
CCCGAAGCGA CTATGTCCGG CGGGCTGCCG CTGTTCCACA GTGATGGCAG CCGAACAAAT
TACGATCGCG CCACTTCCAC CGCCCCCGAT TGGGCCTCGG CGCATACCCA AGGACTCAAT
ACCTTCGCCA GCCTTGAACA TCGTTTTGAT AACGGTTGGG AGCTGAAAGG CACCTACAGC
TATGGCGATA ACTCGCTGAA ATATAATGTG CTGTGGGCTA CAGGTTACCC TGACCCCGTG
ACTAATCTTG GTGCCACCGC AGGCTCAATC GCCTATGTCG ATGGAAGTCG TACCCAACAT
AACCTCGACT TACGGGCGCA GGGAATGTTT GCCCTGTTTG GCCAAGAACA TCAGCTGACC
TTTGGCTGGA CGGGTCAGCG CCAAGAGTTT GCCAACCCTT ACTATTATCC TACGGCCGCC
GTGCCGCCCT TGGGAGATTT TCGCGATCCC AACTTCCAGT ATCCAAAACC TCAGTGGAAA
GAGACTCACA CCACGGGCTC CTTCGGCGAA ACCGAGCAAA GCGCCGCCTA TGTGGCCACG
CAGCTCAATC TGACCGATGC CTTGGCATTG CTCGCGGGCC TGCGCCTTAA CCAGTGGCAA
ACCGACCAAG ATAACTTTGG CAGCATGTAT GACTTTAAGG TCGACAATGA ACTCACCACC
TATTTTGGCC TGACCTACGC GCTCGGTGAG CAATACTCCC TCTACGCCAG TTATACGGAT
ATTTTTGCGC CGCAAACCTT GCAGCGCATC GATGCAAGTT ACATCGACCC CGTCAAAGGC
AAAAACTACG AGGCGGGCAT TAAAGCCAGC TTAATGGATG AAAGCTTAGA TATGTCGTTG
TCGGTATTTG AAATTCGCCA AGACAATGTT GGTGAACGCA CCGGAGATGT ATTGCCAGGC
ACCACTATCC CTGTGTATCG AGAGGTTAAC GGCACTAAGA CCCAAGGCTT TGAGTTTGAA
TCCACAGGCA AAATCACCGA TGACTGGAAT ATCTACTTCG GCTACACCCA ATTCAGCACC
GATGATCCTA AGGGCAATCG CATCAACACC TCATCACCTC GCCAGCAGCT AAAACTCTTT
ACCACTTATA CCTTTAGCGG CAATTGGAAC AAGTTGCAGC TTGGCGCTGG GGTTAATTGG
CAAAGCCGAG TCTATCAAAC CGTCAACTCG CCCTTAGGCA GAGTCGAGGT TGAGCAAGAC
TCCTATGCAT TGGCCAGCTT GATGGCAAGT TATGCCTTTA CCGAGCAGCT AAAGCTAAGC
GCCAATGTGC ACAACGCCTT AGATAAAACC TACTACAGCC AAGTGGGGCA ATTTAGTCAG
TACCAATATG GTACCCCGCG CAGCGTGAGC GTGAATGTAG ATTATCGCTT CTAA
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| Protein sequence | MEFKIIIMKT FPLNRLTAHC QLAITRPELI LCSAILSMPY AYADASDTQK KSTKDIEIIN
VVGAKDLHDN RYKTQAMNTA TGLDLSYLET PQSVTSVTSQ MMHDQQLNSV IEAMTSVAGI
NARPMDNDRY SISSRGIAVT SILYDGVPTT YDTRFNYGDN LIDTAIYERV EIVRGATGLM
TGAGNPSAAI NLIRKRPTQE FMGSTSVSVG SWNNLRGMVD LSSGLNDSGS IRGRVVAAYQ
DKESFQDRYE QQRTTLYGIF ETDITDSTLL TLGVDYQDTT PEATMSGGLP LFHSDGSRTN
YDRATSTAPD WASAHTQGLN TFASLEHRFD NGWELKGTYS YGDNSLKYNV LWATGYPDPV
TNLGATAGSI AYVDGSRTQH NLDLRAQGMF ALFGQEHQLT FGWTGQRQEF ANPYYYPTAA
VPPLGDFRDP NFQYPKPQWK ETHTTGSFGE TEQSAAYVAT QLNLTDALAL LAGLRLNQWQ
TDQDNFGSMY DFKVDNELTT YFGLTYALGE QYSLYASYTD IFAPQTLQRI DASYIDPVKG
KNYEAGIKAS LMDESLDMSL SVFEIRQDNV GERTGDVLPG TTIPVYREVN GTKTQGFEFE
STGKITDDWN IYFGYTQFST DDPKGNRINT SSPRQQLKLF TTYTFSGNWN KLQLGAGVNW
QSRVYQTVNS PLGRVEVEQD SYALASLMAS YAFTEQLKLS ANVHNALDKT YYSQVGQFSQ
YQYGTPRSVS VNVDYRF
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