| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1345 |
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| Symbol | |
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| ID | 4251364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1558666 |
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| End bp | 1560378 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117929 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_733480 |
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| Protein GI | 113969687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0163482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTA GCAAATACCT ACTTTCTACT CAAAAAGAAA CACCTGCGAA TGCAGAAGTC
ATCAGCCATC AATTAATGCT ACGTGCGGGT ATGATCCGCC GTAACGCTTC AGGTCTATAC
AGCTATCTGC CCACGGGCCT GCGTGTATTG CGTAAAGTCG AAGCCATTGT TCGTGAAGAA
ATGAACAAAG CGGGCGCGAT TGAAATCCTT ATGCCTATGG TGCAACCGGC TGATTTATGG
GTAGAAACGG GTCGTTGGGA CAAATTTGGT CCTGAGCTGC TGCGTTTTAA AGACCGCCAT
AACCGTGACT TCGTTCTGGG GCCAACCCAC GAAGAAGTGA TCACCGACTT AATCCGTAAA
GAAGTCAGCT CTTACAAGCA ATTACCACTG AATCTTTACC AAATCCAGAC TAAATTCCGC
GACGAAGTGC GCCCACGCTT TGGCGTGATG CGTTCGCGCG AGTTCCTGAT GAAAGATGCG
TATTCTTTCC ATTTAGACGT GGATACCATG AATGAAACCT ATGAGGCCAT GTATCAAGCC
TATAGCAACA TTCTGTCGCG TATGGGCCTG GCCTTCCGCC CAGTATTAGC CGACACAGGT
TCTATCGGTG GCAGCATGTC ACACGAGTTC CACGTATTGG CGCAAAGCGG TGAAGACTTA
ATCGCCTACT CTACTGGCAG CGACTATGCC GCTAACATCG AGAAAGCCGA ATCACCAATG
CCAACCGAAG CGCGTGGCGC GGCGACTGAA GAATTACGTT TAGTCGATAC CCCAAATGCG
AAAACTATTG CAGAGTTAGT TGAGCAATTC GGTTTAGATA TCACGAAGAC AGTGAAAACC
TTGATTGTGA AAGGTGCGAC GGAAGAAGCC CCACTGGTAG CGCTGATTGT ACGCGGCGAC
CACGAGCTGA ACGAAATCAA GGCAGACAAG TTAGATTTAG TGGCATCACC ATTAGAATTT
GCCCCAGAAG CCCTGATCCG TGACGCCATT GGCGCAGGCC CAGGCTCATT AGGCCCTGTC
GGCCTGAATA TGCCTATCAT CATCGACCAC AGTGTTAGCG TGATGAGCGA CTTCGCCGCC
GGCGCTAACC AAGATGACAA GCACTACTTT GGCATCAACT GGGAGCGCGA TCTGCCACTG
GCACAAGCAG CCGATATCCG TAACGTGGTT GAAGGCGAGC CAACACCTGA TGGTTTAGGG
ACTTACGCTA TGGCTCGAGG TATCGAAGTG GGTCATATCT TCCAACTCGG TACTAACTAT
TCTAAATCGA TGAATGCGAC TGTTCTCGAT GAGAACGGTA AATCACAAGT GCTGCTGATG
GGTTGTTACG GTGTTGGCGT GAGCCGTATC GTGGCAGCTG CCATTGAGCA AAACTTCGAT
GATCGTGGCA TTGTATGGCC AGAAGCGATT GCCCCATTCA GTGTGGGCAT TCTGCCAATG
AATATGCACA AGTCACACCG CGTGACCGAT ATCGCCGAGC AGTTATACAA AGACTTAAGT
GCTGCGGGTA TCGATGTGCT ACTGGATGAC CGTAAAGAGC GCCCAGGCGT CATGTTCGCC
GATATGGAAC TGATTGGTAT TCCACACACT GTGGTGATTG GCGATCGCAA TATCGACGCT
GGCGTATTTG AATACAAAAA CCGCCGCACC GGTGAAAAGC AAGATGTGCC ATTCGACCAA
ATCGTCGATT TCTTAAAGAA TCTGCAAGCT TAA
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| Protein sequence | MRVSKYLLST QKETPANAEV ISHQLMLRAG MIRRNASGLY SYLPTGLRVL RKVEAIVREE
MNKAGAIEIL MPMVQPADLW VETGRWDKFG PELLRFKDRH NRDFVLGPTH EEVITDLIRK
EVSSYKQLPL NLYQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHLDVDTM NETYEAMYQA
YSNILSRMGL AFRPVLADTG SIGGSMSHEF HVLAQSGEDL IAYSTGSDYA ANIEKAESPM
PTEARGAATE ELRLVDTPNA KTIAELVEQF GLDITKTVKT LIVKGATEEA PLVALIVRGD
HELNEIKADK LDLVASPLEF APEALIRDAI GAGPGSLGPV GLNMPIIIDH SVSVMSDFAA
GANQDDKHYF GINWERDLPL AQAADIRNVV EGEPTPDGLG TYAMARGIEV GHIFQLGTNY
SKSMNATVLD ENGKSQVLLM GCYGVGVSRI VAAAIEQNFD DRGIVWPEAI APFSVGILPM
NMHKSHRVTD IAEQLYKDLS AAGIDVLLDD RKERPGVMFA DMELIGIPHT VVIGDRNIDA
GVFEYKNRRT GEKQDVPFDQ IVDFLKNLQA
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