Gene Shewmr4_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1326 
Symbol 
ID4251346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1536574 
End bp1537668 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content31% 
IMG OID638117911 
Producthypothetical protein 
Protein accessionYP_733462 
Protein GI113969669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00525591 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAGGGCA GTATGAAACT TTTGTATATT TCAAAGTTCC CTAAGAAAAA AGATGGTGGT 
TCTGTAGTTT CTAATCAGTT CTTGTCGTTG CTTTCGTCAC TTACACATTT TTCATCGTTA
TTGAAGTTTG AAATTTCATC ATACAGTAGT AATTTGAATA GATTTTTTTC ACTTTTTATT
CTTAGAGGTT TTGGTTTGTC TTACACCCAA GAACGCGAAA TAGTCAATTT GATATCCGCC
AATAACCTTA GTCATGTTTG GATCGATGGT TCAACATATG GTTGGTTGGT TAGGTTGATT
GCTAAAAAAA CCAACGCAAA AATATTTGTT TTTCATCATA ATGTAGAGTT TAAATATACT
TTAGAGAGAA TTAAGTCAGG TGAATATATT CATGTGTTGT TTCTCTTAAA TACATACATC
AATGAATACT TGTCAATAAA ATATGCAGAT AATACTATAG TTATGAATGA TAGAGATATA
AAAAATATTC ATAAATTATA TCCAACTCAA TCATCTGATC TTAAAGCTAC AATTATTCCT
TTGCCCTTAA AGGATAGATG TGCTGGTATG TTATTTAATA CTAAACCAAT TTCATTGTCT
AAATTAATTT TCATTGGTAG TAATTTTTAT GCAAATCGAT TCGGAATTAA GTGGTTTGTA
GATAATGTTA TAGACTCAGT TGAAAATGAA CTGCTGATTA TAGGTCAAGG TATGGACTCT
TCTCTTGGAA TAAACCATCC AAGGGTGACG ATAGTAGGAG AGGTTGATAA CGTAGATGAA
TATTATGTTG ATAGCTCTAT TGTAATAAGT CCTATATTTC ACGGCTCTGG GATGAAGACA
AAAACGGCGG AAGCTTTTAT GTTTAATATG TATTTTTTAG GAACGGATGA AAGCCTTGTA
GGCTACGATG TTGCCGGATG TTCTTCCGTT TTTCGTTGTA ATACTGCAGA TGAGTTTATT
AATTCAATAA AACGATTGAC TGAAAGTGTT TATAAACCAT CAGATTCTAG AAAGGTTTAT
CTGCAATCAA ATACTCTTGA AGTTAGTCAA AGGATTTTAT TGCAAAGTTT TCAAGATAAA
GGTACTTTAA ATTGA
 
Protein sequence
MEGSMKLLYI SKFPKKKDGG SVVSNQFLSL LSSLTHFSSL LKFEISSYSS NLNRFFSLFI 
LRGFGLSYTQ EREIVNLISA NNLSHVWIDG STYGWLVRLI AKKTNAKIFV FHHNVEFKYT
LERIKSGEYI HVLFLLNTYI NEYLSIKYAD NTIVMNDRDI KNIHKLYPTQ SSDLKATIIP
LPLKDRCAGM LFNTKPISLS KLIFIGSNFY ANRFGIKWFV DNVIDSVENE LLIIGQGMDS
SLGINHPRVT IVGEVDNVDE YYVDSSIVIS PIFHGSGMKT KTAEAFMFNM YFLGTDESLV
GYDVAGCSSV FRCNTADEFI NSIKRLTESV YKPSDSRKVY LQSNTLEVSQ RILLQSFQDK
GTLN