Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1326 |
Symbol | |
ID | 4251346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1536574 |
End bp | 1537668 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638117911 |
Product | hypothetical protein |
Protein accession | YP_733462 |
Protein GI | 113969669 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0103885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00525591 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGAGGGCA GTATGAAACT TTTGTATATT TCAAAGTTCC CTAAGAAAAA AGATGGTGGT TCTGTAGTTT CTAATCAGTT CTTGTCGTTG CTTTCGTCAC TTACACATTT TTCATCGTTA TTGAAGTTTG AAATTTCATC ATACAGTAGT AATTTGAATA GATTTTTTTC ACTTTTTATT CTTAGAGGTT TTGGTTTGTC TTACACCCAA GAACGCGAAA TAGTCAATTT GATATCCGCC AATAACCTTA GTCATGTTTG GATCGATGGT TCAACATATG GTTGGTTGGT TAGGTTGATT GCTAAAAAAA CCAACGCAAA AATATTTGTT TTTCATCATA ATGTAGAGTT TAAATATACT TTAGAGAGAA TTAAGTCAGG TGAATATATT CATGTGTTGT TTCTCTTAAA TACATACATC AATGAATACT TGTCAATAAA ATATGCAGAT AATACTATAG TTATGAATGA TAGAGATATA AAAAATATTC ATAAATTATA TCCAACTCAA TCATCTGATC TTAAAGCTAC AATTATTCCT TTGCCCTTAA AGGATAGATG TGCTGGTATG TTATTTAATA CTAAACCAAT TTCATTGTCT AAATTAATTT TCATTGGTAG TAATTTTTAT GCAAATCGAT TCGGAATTAA GTGGTTTGTA GATAATGTTA TAGACTCAGT TGAAAATGAA CTGCTGATTA TAGGTCAAGG TATGGACTCT TCTCTTGGAA TAAACCATCC AAGGGTGACG ATAGTAGGAG AGGTTGATAA CGTAGATGAA TATTATGTTG ATAGCTCTAT TGTAATAAGT CCTATATTTC ACGGCTCTGG GATGAAGACA AAAACGGCGG AAGCTTTTAT GTTTAATATG TATTTTTTAG GAACGGATGA AAGCCTTGTA GGCTACGATG TTGCCGGATG TTCTTCCGTT TTTCGTTGTA ATACTGCAGA TGAGTTTATT AATTCAATAA AACGATTGAC TGAAAGTGTT TATAAACCAT CAGATTCTAG AAAGGTTTAT CTGCAATCAA ATACTCTTGA AGTTAGTCAA AGGATTTTAT TGCAAAGTTT TCAAGATAAA GGTACTTTAA ATTGA
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Protein sequence | MEGSMKLLYI SKFPKKKDGG SVVSNQFLSL LSSLTHFSSL LKFEISSYSS NLNRFFSLFI LRGFGLSYTQ EREIVNLISA NNLSHVWIDG STYGWLVRLI AKKTNAKIFV FHHNVEFKYT LERIKSGEYI HVLFLLNTYI NEYLSIKYAD NTIVMNDRDI KNIHKLYPTQ SSDLKATIIP LPLKDRCAGM LFNTKPISLS KLIFIGSNFY ANRFGIKWFV DNVIDSVENE LLIIGQGMDS SLGINHPRVT IVGEVDNVDE YYVDSSIVIS PIFHGSGMKT KTAEAFMFNM YFLGTDESLV GYDVAGCSSV FRCNTADEFI NSIKRLTESV YKPSDSRKVY LQSNTLEVSQ RILLQSFQDK GTLN
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