| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1300 |
|---|
| Symbol | |
|---|
| ID | 4251320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1507310 |
|---|
| End bp | 1507693 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638117885 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_733436 |
|---|
| Protein GI | 113969643 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.162649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACAAGA ATATGAAGAT TCTCATCGTT GATGACTTTT CGACAATGAG ACGTATCATC
AAGAACTTGT TGCGAGACTT GGGATTTAAC AATACCCAAG AAGCAGACGA CGGCTCAACC
GCGCTGCCTA TGCTACAGAA GGGCGACTTT GATTTTGTCG TGACAGACTG GAACATGCCA
GGTATGCAGG GTATTGATTT GCTTAAGGCT ATTAGAGCCG ATGATTCCCT AAAACATTTG
CCCGTGTTAA TGGTTACCGC CGAAGCAAAA CGTGAACAAA TTATTGCTGC CGCACAAGCC
GGTGTTAACG GCTATGTGGT TAAGCCTTTT ACCGCAGCAA CACTAAAAGA GAAGTTAGAT
AAAATATTCG AACGACTCGC TTAA
|
|---|
| Protein sequence | MDKNMKILIV DDFSTMRRII KNLLRDLGFN NTQEADDGST ALPMLQKGDF DFVVTDWNMP
GMQGIDLLKA IRADDSLKHL PVLMVTAEAK REQIIAAAQA GVNGYVVKPF TAATLKEKLD
KIFERLA
|
|---|
| |