| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1296 |
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| Symbol | flhA |
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| ID | 4251229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1502183 |
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| End bp | 1504282 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117881 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_733432 |
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| Protein GI | 113969639 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTTA AAGCCTCCCT AGGCCAAGTA AAACAGTTGA AACTGAGCTC TTTCAAGGGC
ATAGGTACGC CAATGCTAGT GCTTGCGGCA TTGGCTATGA TTGTATTGCC TATCCCGCCG
TTTCTACTCG ACGTTTTATT CTCTTTTAAC ATTGCCTTGG CTTTGATTGT TCTTCTTGTC
GCGATTTATA CCGACAGACC TTTAGATTTT GCTGCTTTCC CAACCGTTTT ATTAGTCGCG
ACACTGCTGC GACTCGCGCT TAACGTGGCA TCGACCCGTG TAGTATTACT CGAAGGCCAT
AATGGTGGTG ACGCCGCCGG TAAGGTGATT GAGGCCTTCG GCTCAGTGGT GATTGGCGGT
AACTATGCAG TGGGTTTGGT CGTATTTATC ATCTTGATCA TTATCAACTT TGCCGTTGTG
ACTAAAGGTG CTGGCCGTAT TGCCGAGGTG AGTGCTCGCT TTACCTTAGA TGCGATGCCC
GGTAAGCAAA TGGCCATCGA TGCCGACTTG AACGCAGGTA TTATTAATCA GGATCAAGCC
AGAACCAGAC GCGCCGAGGT GACCCGCGAA GCCGACTTCT ATGGCGCAAT GGACGGTGCA
TCTAAGTTTG TGAAGGGCGA TGCGATTGCC GGTATCATGA TTTTGGTTAT CAACATTCTC
GGTGGGTTTA TTATCGGGAT TGTGCAACAC GGTTTGACAT TCTCCCAAGC TGTTGAAATT
TATACCCTGT TAACCATTGG TGACGGTCTC GTCGCACAAA TTCCTGGTCT ATTACTGTCA
ATCGCCGCGG CGTTGATGGT GACCCGTCAA AATGAATCTG GCGATATGGG CCAGATGCTG
ATTAGTCAGA TGTTTGACAG TCACAAGTCA CTCAGTATTG CGGCCGGCGT ACTCTTTGTC
ATGGGTATTG TGCCAGGCAT GCCACACATG GCGTTTTTAA GCTTTGCCGT GATCACAGGT
GGTGCCGCTT ACTTTATATT TAAACGTAAT GAAGCCAAAC GTGCCAAAGC CCTTGAGCAA
GTCAAAACGG GCCCAGCGGA AAGAGCCGAA AGAGAACCTA AAGAACTTAG CTGGGACGAT
GTACACCATG TTGACACTAT CGGTCTGGAA GTGGGTTATC GTTTGATCCC ATTAGTCGAT
AAAGGGCAAG GTGGTGAATT ACTAAGTCGG ATCAAAGGGG TACGTAAAAA GCTTTCTCAA
GAGCTGGGCT TCTTGGTGCC TGCGGTACAT ATTCGTGACA ACCTCGATTT ATCACCCAAT
GCCTATCGCA TCTCGTTAAT GGGCGTGGTG GTTGGAGAGG CGGATATTCG CCATGACTGC
GAACTCGCCA TCAACCCAGG CCAAGTTTAC GGTAAGCTCG ATGGTATCGA AACGCGTGAT
CCTGCCTTTG GTCTCGAAGC CGTGTGGATT GCCCCTGAGC TGCGTGAACA TGCACAAACC
TTAGGTTATA CCGTGGTGGA TGCCGCGACA GTGGTGGCTA CCCATATCAG CCAAATATTG
ACGAATAACG CGGCGAAACT CTTAGGCTAT GAAGAAGTGC AACAACTGAT GGATATGCTT
GCCAAGCATT CGCCTAAGCT GGTGGATGGC TTTATTCCTG ATGTGATGCC GCTTGGAAAT
GTCGTAAAAG TGATGCAAAA CCTATTAAAT GAAGGAGTTT CTGTCAGAGA CTTGCGTACC
ATAGTGCAAA CTTTGTTAGA ATACGGCACT AAGAGTAACG ATACTGAAGT GTTAACGGCG
GCAGTACGTA TCGCATTGAA GCGCATGATA GTTCAAGAGA TCTCGGGTCC TGAACTTGAA
ATACCTGTCA TAACTTTGGC GCCAGAGTTG GAACAGATGT TGCATCAGTC AATGCAAGCA
ACCGGTGGCG ATGGCCCAAA TATCGAACCT GGTCTTGCGG AGCGTATGCA GCAATCCTTA
GCGGATGCCG CTCAAAAGCA AGAAATGGTT GGTCAGCCCG CTATTTTGCT AACGTCAGGT
ATGTTACGTG CGACACTGTC TCGCTTTGTT AAATATACTA TTCCTAATCT CAGAGTGATT
TCTTACCAAG AAATCCCCGA TGAAAAGCAA ATACGCATAG TGTCTGCCGT CGGCCAGTAG
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| Protein sequence | MDVKASLGQV KQLKLSSFKG IGTPMLVLAA LAMIVLPIPP FLLDVLFSFN IALALIVLLV
AIYTDRPLDF AAFPTVLLVA TLLRLALNVA STRVVLLEGH NGGDAAGKVI EAFGSVVIGG
NYAVGLVVFI ILIIINFAVV TKGAGRIAEV SARFTLDAMP GKQMAIDADL NAGIINQDQA
RTRRAEVTRE ADFYGAMDGA SKFVKGDAIA GIMILVINIL GGFIIGIVQH GLTFSQAVEI
YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQML ISQMFDSHKS LSIAAGVLFV
MGIVPGMPHM AFLSFAVITG GAAYFIFKRN EAKRAKALEQ VKTGPAERAE REPKELSWDD
VHHVDTIGLE VGYRLIPLVD KGQGGELLSR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN
AYRISLMGVV VGEADIRHDC ELAINPGQVY GKLDGIETRD PAFGLEAVWI APELREHAQT
LGYTVVDAAT VVATHISQIL TNNAAKLLGY EEVQQLMDML AKHSPKLVDG FIPDVMPLGN
VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSNDTEVLTA AVRIALKRMI VQEISGPELE
IPVITLAPEL EQMLHQSMQA TGGDGPNIEP GLAERMQQSL ADAAQKQEMV GQPAILLTSG
MLRATLSRFV KYTIPNLRVI SYQEIPDEKQ IRIVSAVGQ
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