Gene Shewmr4_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1254 
Symbol 
ID4251310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1462765 
End bp1463190 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content44% 
IMG OID638117840 
ProductFlgN family protein 
Protein accessionYP_733391 
Protein GI113969598 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA TAGCTAAACT GGTAGATCAA CAACACGCCC ATTTGGCTGT TCTTAAACAG 
ATTATTCTCA AGGAAAAAGG CGCTTTGGTT GACCAAAACG CCGATTTGCT TTTATCGCTT
GCGGAGCAAA AATCAACATG CCTGCAAGAA CTCAAGGCCA ACGATGACTT ACTGGCCAAT
CACAGCGATA AATCCTTACT CACCTCGCAA GTAGAACTAT CCCATAAAAT GGCCGCCGTA
AAAGAGGCCC TTGCCGAATG TAAGGATCTT AACGCTCAAA ATGCCAGTCT CATCGAGATG
AATTTGGCGA GTCTAAACCG TTTTGCCCAA GCCTTACAGG CGAGCCGAAA CGCGACTACT
CTAACCTATA ACGATAAAGG CAGAACCTCG ACCCTTTCTA GCTTAGGCAA TGATTTAAAA
GCATAA
 
Protein sequence
MTEIAKLVDQ QHAHLAVLKQ IILKEKGALV DQNADLLLSL AEQKSTCLQE LKANDDLLAN 
HSDKSLLTSQ VELSHKMAAV KEALAECKDL NAQNASLIEM NLASLNRFAQ ALQASRNATT
LTYNDKGRTS TLSSLGNDLK A