Gene Shewmr4_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1216 
Symbol 
ID4251255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1417033 
End bp1417242 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content47% 
IMG OID638117801 
Producthypothetical protein 
Protein accessionYP_733353 
Protein GI113969560 
COG category[S] Function unknown 
COG ID[COG3530] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.080424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAC AACAGCTTAT CGATGCCGTC AATCAGGTGA TGCCCTTTGG CAAATATGCC 
GGTCGCCGCT TACTCGAATT GCCCGAACCC TATCTAGTGT GGTTTCATCA ACAGGGGTTT
CCGAAGGGAA AGTTAGGTGA GCAGTTAGCG CTGATTTATG AGGTAAAACT CAACGGCCTT
GAGGGCATGT TAAAACCGCT ATTGAAATGA
 
Protein sequence
MDQQQLIDAV NQVMPFGKYA GRRLLELPEP YLVWFHQQGF PKGKLGEQLA LIYEVKLNGL 
EGMLKPLLK