Gene Shewmr4_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1171 
Symbol 
ID4251455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1377726 
End bp1378271 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content48% 
IMG OID638117752 
Producthypothetical protein 
Protein accessionYP_733308 
Protein GI113969515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.101943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTA TGGCGAGAAA TATACTCAAT ATCTCAAAGT ATCAGGGCTT TATACTCTAT 
AACGCCTTGA GTTTTCAATG TGTGTGGTGG ACTGGCGTGT TGTTTGGCAA TCGCGCGCTG
TTACTGAGTA TCCCTCTGTT AGTGCTGCAT TTTATATTAC TGCCGCGAGT GGAAACCGCC
GCCGCTATCC CTCGGGACTT AAGTACAATG CTTAAGATTG GGTTACTCGG TATGGCGGTT
GATAGCCTGC TTACGTTGGC TAGTGTATTT GAATTTTCGG TTTTTCCCGC TTGGTTGGCG
TGTCTCTGGT TGCATTTTGC GGTGAGTTTG CACCATAGCC TTAAGCTTAT CCGCGCGTTT
GCGATTGTAT TACAAGCTAT TTTAGGGGCA ATCTTCGGTA GCCTGAGTTA CTTGGCTGGG
GCCGCATTTT ATGCCGTGAG CCTTCCCTAT GGTGAGGGCG TTTCTGCGGT GTTTCTCGCG
ATTATTTGGG CTGTGTCATT GCCTCTTTTC ATCAAACTCT CGCGTAGCCA TAGGTCTATG
GGATGA
 
Protein sequence
MSSMARNILN ISKYQGFILY NALSFQCVWW TGVLFGNRAL LLSIPLLVLH FILLPRVETA 
AAIPRDLSTM LKIGLLGMAV DSLLTLASVF EFSVFPAWLA CLWLHFAVSL HHSLKLIRAF
AIVLQAILGA IFGSLSYLAG AAFYAVSLPY GEGVSAVFLA IIWAVSLPLF IKLSRSHRSM
G