| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1044 |
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| Symbol | |
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| ID | 4251117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1218258 |
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| End bp | 1220630 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117617 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_733181 |
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| Protein GI | 113969388 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.713733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00851048 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTAG ATAACCATAG TGCACTCATA GAACAGCTCA AGCCGCTGCT CATGGAACCG
AATTTCCAGG AGATTTTCCA GCAGTTGACT GTCGATGAAA ACAATTCGAC CCGTTTTCTG
CTGAAAATGG AGTTGAATCG TTTGGCTTCT CCCTGCACTC GGATTATCGA TCTTAGAGAC
AAATCTGAGT TGCCCTGCAC CGAAGTCATG CTCGGCCAAC AGCGCCATTT TCTCGATGAG
CCCGCCAAGC ATAGTCTGCA AGCGGCCATG TCTTTATACC GCAATAAGTA CACCTTAGGG
GTGTATGAAT ATGTCATCGC CGCCCATCAA CAGCGGCGAC AAAAACTGCG TCAGGTAACA
CAACAAACCG ATAGCGTCGA ACCCGAGCCT TTTATGGTGC CCGGCGTGGT GCTCGGCAGT
TATTTTAACC GCGCCGAAGA GCGGATGAAT TACAGTATCC GCATTGCGGT GTCGCAACCC
GGGCGGACGG AAATGCCGGG GATCACCGTC GATTTATCGG TTGGCGGTGC GCGCATTCGC
TTGGCGGCGA ATCATCCCTT CGATCTCGAC AAGCCCCTTA AGGTCAAACT GCTCGAGCTG
AGTGAAGAAT ATTACTACCC CGATTTACAA CTCGGGGTCG ATTATCAGAT TGTCGATAGC
CAAACCAATG GTGAATTCGT TTGGTTACGC TTACGCCGGA TTGGTGGTAC CGATGCTTTA
GGTGAAATGC TGGGCAACTT AATCCGTGGT TATAAACTTC GTTATAAGCT GGATGTGAAT
GATGTCTTAG TGACGGCCTC GGGTTTGGGG TTCGAGCGTC ATTACCTACC GCACCTGCCG
CATCTGCCTT TGTTCCTCAA TCAGCAGTCC CAATCCATCA CCCATATGCT GCTGAGCCGC
GACAATCAGC AGATAGTGCA TTATTTTCAG GATGAGAATG ATATCAGCCA GTTGCCCGCC
ATGCTGACGC CAGCAAGGCT CTCTGCGCTG GTCAATCATC CTGAAAACCC CGATTACGGA
TTATTTTTTA GCTTTACCTA CAACGCTCAA GGCTCACTGT ATTTTTACTC GGCCACCTTA
GCCGAATTAA AAGCCAAGGG CATGACGTCT TTATTCCTCG GTTTTGCTTC AACGAAACCG
AGCTGGCGGA TTTTCAAACT CATCCCAGAT AAGATTTACC ATGCTAAAGG TTATCGCCGT
GCGACCTTGC CGGGGGATGA TGCCAAGTAC AGCCCGCTGG TGGAGCAGCA ATTGTCCCAG
TTCAGCCATA TGCTGCAACT TATAGACCTC ACCAATGAGG ATGAAAGGGC CAGCTACAAA
GCCTGGCAGG ACGACAGCAA TGCCAATGCG CTCAAAGCCT TTGGCCAACA GCGCCTAACG
GCACACCAAA TCAAGCCAGT TTCGATGCAA TTTAGTGAGC GTCGACAGGA GGCTCGTTTT
GCCTTCAAAA CCTTAGTCAA TGTGTCACAG GGAGCCCTAA AAGCGACGGG GATAACCTTA
GATATTTCAG GCCGAGGTAT GCAGCTGACG CTGGATAATC CGACTGAGTT TGCCACCAAC
AAGCCAATAA TGATCAGTTT GCCTAAGTTG CAGACCATTG CCGGTAAGAC TCAGCTGGAT
AATTTACCCT ACCGTCTAGT GCGTACCCGT AAAAATGGCG TGACGCTCCA TTTAGCTGCG
GTCATGGGTC ACACGCCCCA CGTTGGGGTG GAGTTTTTAA ATAAACTGAT CGCCCATAAC
CGTGAAAAAC TCGAACAGCT GACCGAGAAC AATAGCGAGA TAAAAGAGCT CGCCGATGGT
TTAAAAAACA TTCTGCTACG CGAGCTGCAC TCGGTCCCCT ACTTTGTTGA AAAAACAACA
AAATCGGCAC AGGTCGCCTG TTTAGGGGTC AGCACTGAGC ATGATGAAAT CAGCGATATT
TTTGCCGCAG GTTCCTCGGA TACCCTGCAA TATAATCTCG CGCCGCTACT AAAAGATGGA
TTCTTTAAAC GGGACATTCT CGATCCTATC CGCCAAATGA AGCCGCAGCA GGATATGGAT
TTTATTGAGG TATTTATCCA ATTAACCCGC CAGTCCCGCG GTCAATTCCA TTTAAAATGT
GTTCCCGCCA CCGAGCTTGG AGATGCGCAG GCCAAAATCG CCTTTATCAA CCAAAGTAAA
CTGGCGGGAC GCTTTATGGC GCTGCGGATT TACCGTGGTG CAACCGAGAA ACCGGATATG
GGTTACCTGC GCCGCGAATT GGAATACATC AACATCCACG CAAACCACAG GGCGAAACAA
CTCGAGGAAC AACTCTGGCG GATTATCGGT GTAGGTGAGC TACTCGATAT CACCCAAGAG
GTGGAGCTGC GCTATCCTGC TCTGCAAAAA TAA
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| Protein sequence | MSLDNHSALI EQLKPLLMEP NFQEIFQQLT VDENNSTRFL LKMELNRLAS PCTRIIDLRD
KSELPCTEVM LGQQRHFLDE PAKHSLQAAM SLYRNKYTLG VYEYVIAAHQ QRRQKLRQVT
QQTDSVEPEP FMVPGVVLGS YFNRAEERMN YSIRIAVSQP GRTEMPGITV DLSVGGARIR
LAANHPFDLD KPLKVKLLEL SEEYYYPDLQ LGVDYQIVDS QTNGEFVWLR LRRIGGTDAL
GEMLGNLIRG YKLRYKLDVN DVLVTASGLG FERHYLPHLP HLPLFLNQQS QSITHMLLSR
DNQQIVHYFQ DENDISQLPA MLTPARLSAL VNHPENPDYG LFFSFTYNAQ GSLYFYSATL
AELKAKGMTS LFLGFASTKP SWRIFKLIPD KIYHAKGYRR ATLPGDDAKY SPLVEQQLSQ
FSHMLQLIDL TNEDERASYK AWQDDSNANA LKAFGQQRLT AHQIKPVSMQ FSERRQEARF
AFKTLVNVSQ GALKATGITL DISGRGMQLT LDNPTEFATN KPIMISLPKL QTIAGKTQLD
NLPYRLVRTR KNGVTLHLAA VMGHTPHVGV EFLNKLIAHN REKLEQLTEN NSEIKELADG
LKNILLRELH SVPYFVEKTT KSAQVACLGV STEHDEISDI FAAGSSDTLQ YNLAPLLKDG
FFKRDILDPI RQMKPQQDMD FIEVFIQLTR QSRGQFHLKC VPATELGDAQ AKIAFINQSK
LAGRFMALRI YRGATEKPDM GYLRRELEYI NIHANHRAKQ LEEQLWRIIG VGELLDITQE
VELRYPALQK
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