| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0969 |
|---|
| Symbol | |
|---|
| ID | 4251620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1135997 |
|---|
| End bp | 1137130 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638117532 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_733106 |
|---|
| Protein GI | 113969313 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAGC ATTCCCCAGA ACCGTCGAGC TCGGCGAATA CAACACAATC GAATATCAAA
ATTGCGACCG TGAATCTATT TAACTTTATC GAGCCGCCCT CTGCCTTTTA CGATTTTGAG
AATATCTATA GCCACGGCCA ATGGCAGAAA AAGTGCCAGT GGTTTAGCGA GTTATTGAAT
CAACATCATC CGGATATTGT CGGGTTTCAG GAGGTGTTTA GCCCCGAACC GTTACGCCAG
CTTGCGTTGC AGCAGGGACT CACTCACTTT GCGGTGGTCG ATAGTGCGAC CTTAGTCAGT
GACTATATCT ACCAAAGCCC TGTGGTGGCG TTAGCGTCTC GCTTCCCTAT CCTTGAGGTA
CACGCTATCG AACCAGAGGT GCACTTAGTG GCGGCGATGG GTCTGTCGAG CGAATTTAGC
TTTAGCCGTA AAGTGTTACG GGCGACAGTG GCGGTGCCGC AGATTGGCCC CTGTGATTGC
TATGTGGTGC ATTTTAAATC TAAGCGGCCA GGATTGGCCT TAGAGCCGCA TCCCTTGGGC
TTGTCGTTAA ATGCGCCGTC GGATCTTAAG TTACACGCCG AGACTAAGCT ATTAACCGAA
CAAGCTCTTG GTCGCTGGGC CTCGACCATG CAGCGGGGCG CCGAGGCGGC GTTGCTGTTC
CATGCCATAC TCGCCAGAAG ACAGAGTGCC AAATATCCAG TGATCCTGAT GGGGGATTTT
AACGATAGTT TGTCCTTAGG CGCGCTGGAT GCGTTAACGC TCCAAGGCGA AGCGCTGCAC
AGTAACGATA TTAAAGCCGC AGGGCTTGGG CATTTATCCG ATGCGGCGTT AGCGCAAGTA
TTTGCCCACT ATCGATTACA AGATGCCTAT GAGCTGTTTA TCGAAGCCAA TTTAGCCGAT
AACGCCGTCC ATTACCGTGA GCATAGGTCG CCCACCCATT ACTATGGTCC TAAAGGATCA
GTGCTGGATT ATGTGTTGCT CTCCAATGAG TTTGATGCCA GCGATAGCCG CAGTTTGGCG
CAGGTGGTGG ATTATCAGAC CTGCGATAGA CACTTAGTCA GGCCCGAATA TGAGCGCGAT
GCCTATAGTA CCGACCATGC GCCCGTGATA GTGGAGTTGG CACTGCGGCG TTAG
|
|---|
| Protein sequence | MAQHSPEPSS SANTTQSNIK IATVNLFNFI EPPSAFYDFE NIYSHGQWQK KCQWFSELLN
QHHPDIVGFQ EVFSPEPLRQ LALQQGLTHF AVVDSATLVS DYIYQSPVVA LASRFPILEV
HAIEPEVHLV AAMGLSSEFS FSRKVLRATV AVPQIGPCDC YVVHFKSKRP GLALEPHPLG
LSLNAPSDLK LHAETKLLTE QALGRWASTM QRGAEAALLF HAILARRQSA KYPVILMGDF
NDSLSLGALD ALTLQGEALH SNDIKAAGLG HLSDAALAQV FAHYRLQDAY ELFIEANLAD
NAVHYREHRS PTHYYGPKGS VLDYVLLSNE FDASDSRSLA QVVDYQTCDR HLVRPEYERD
AYSTDHAPVI VELALRR
|
|---|
| |