| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0967 |
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| Symbol | |
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| ID | 4251618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1133302 |
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| End bp | 1134069 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117530 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_733104 |
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| Protein GI | 113969311 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG CCACACATCT ACTCGTCATG ATTTGCCTGT GTATTCTTCC GTATCGAGCG
CTTGCCGCCC TCAGTATCTA TACCGAAGAA TGGGCTCCCA TTAGCTTTTC AGTCGACGGT
AAACCCGATG GTTTAGCGGT GCAAGTGGTG CAAGAAATTC AAAAGCGCGT GAATAATCAG
GATCCCATCA AGGTCGTTCC CTGGGCACGC GGATGGAAAA TCATGACAGA ACAGCCTAAT
ACTGTGCTGT TTGCCATGAC CAGAACGCCT GCACGGGAAC AACTGTTCAG CATGATTGGT
CCTATCGCCA CCGGGACCAT TAACTTCTAC GCCCTAAAAG ACAGTCAACT CAAGATTAAC
TCGATTGATG ATGCCAAGCA GGCGAAGGCC GTGGGGGTGT ATCGCTCTTC CGTGGAAGAG
CAATTATTAA TGGATCATCA GTTTATGAAT ATTGCGCCCT CTACCACGCC GCTACTGAGC
GCAAAGCAAC TAATGAAAAA GCGTATCGAT TTATGGTGCA ATACTAACCT CACCGCACCG
AGTATTCTCG CCGAAGCGGG CGCGAGTATG GATGACGTCA AATCCCTCTA CACGATCAAC
GAAAATCATC TGTACATTTC TTTTTCGAAG GGAACACCAA CGGAGGAAGT CGATAAGTGG
AAAGAGGCAC TTATCAACAT CAAGGCCGAT GGCACCTTTG CACAAATCTA TCACCGCTGG
CTGCCCAATG ACGCGCCGCC AATGGAAACC GAGCGCGTTG GACAATAA
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| Protein sequence | MKFATHLLVM ICLCILPYRA LAALSIYTEE WAPISFSVDG KPDGLAVQVV QEIQKRVNNQ
DPIKVVPWAR GWKIMTEQPN TVLFAMTRTP AREQLFSMIG PIATGTINFY ALKDSQLKIN
SIDDAKQAKA VGVYRSSVEE QLLMDHQFMN IAPSTTPLLS AKQLMKKRID LWCNTNLTAP
SILAEAGASM DDVKSLYTIN ENHLYISFSK GTPTEEVDKW KEALINIKAD GTFAQIYHRW
LPNDAPPMET ERVGQ
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