| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0940 |
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| Symbol | |
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| ID | 4251871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1097965 |
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| End bp | 1098573 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638117503 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_733077 |
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| Protein GI | 113969284 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
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| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0130823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACATT ATATTAGCCT GTTAATTCGC TCTGTTTTCA TCGAAAACAT GGCACTGGCC
TTCTTCTTAG GTATGTGTAC TTTCTTAGCG GTATCGAAGA AAGTGACTAC TGCAATGGGC
CTGGGGATTG CGGTAGTTGT AGTGTTAACT ATCTCTGTTC CTGCTAACCA AGTTATTTAC
CAAGGGCTGT TAGCACCTGG CGCACTGGCT TGGGCTGGTG CACCTGAAGC TGACCTAAGC
TTCTTGAAAT TCATTACCTT TATCGGTGTG ATTGCGGCTT TAGTTCAAAT TCTGGAAATG
GCACTGGATA AGTACTTTCC TCCTTTGTAC AACGCGTTAG GTATCTTCTT ACCTCTAATC
ACTGTGAACT GTGCGATTTT CGGTGCGGTA TCATTCATGG TTGAGCGTGA CTACAAGCTG
GGCGAAAGTG TGGTGTTTGG TTTCGGCTCT GGAGTAGGTT GGGCATTAGC TATCGTATTG
ATGGCCGGTA TCCGTGAGAA GCTGAAGTAT GCCGATGTGC CGAATGGCCT GCGTGGTTTA
GGTATTACCT TTATTACCGC TGGTTTAATG GCCTTAGGTT TCATGTCGTT TTCTGGTGTG
TCTCTGTAA
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| Protein sequence | MEHYISLLIR SVFIENMALA FFLGMCTFLA VSKKVTTAMG LGIAVVVVLT ISVPANQVIY
QGLLAPGALA WAGAPEADLS FLKFITFIGV IAALVQILEM ALDKYFPPLY NALGIFLPLI
TVNCAIFGAV SFMVERDYKL GESVVFGFGS GVGWALAIVL MAGIREKLKY ADVPNGLRGL
GITFITAGLM ALGFMSFSGV SL
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