| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0834 |
|---|
| Symbol | |
|---|
| ID | 4251974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 983557 |
|---|
| End bp | 985392 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638117397 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732971 |
|---|
| Protein GI | 113969178 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.990048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGAA GTGTATTAGT TATTTTATCT ATTATTTCAG TATCAGCTAT AGCGGTTGAA
AGTCCTTATT CAATTGATAA GACGTATGAA AATAACCTGC CTAAATCATC CTTAAAGGTG
GCTTTCTCTG AAGCTAACAA CGAAATATTA ATATCTGGTA CTGCTAGTGA TGAGTTTTCT
GCTGATAAAA GAATTTATTT ATGGAAGTAT AATGTTGATA ATAATGGGGT GGATTATATT
AGCTCTGCCA GTTTTGGTAT AGCATCAGAT CTCGTTGGTT ATATTAATGT GGAACCTATA
GGTGAATATA ATAAAAACTA TTACGCTTTA TCTGAGTCAA ATTATGATGG AGCTAGAAAA
TTAGTTAGAT TTACTCTTGA AGGCAATGAG TTATCATTGT CTCAAGAAGT AGAATTTTCA
TCTAGTTCAG GTCAGTACGG TTCATATGTA GAACAGATTG AATTTGTAAA TAATAATACC
ATTGTTGCTT TGCATCCAAA TCATGATGAT ACTCTGAGTG GAAAAGTCAG TTACGATTAC
AGTGTTTGTA ATTTAAGTGG AAATGGTGAG ATAGATTCTT GCGAGCGAAA AAAAATCTTA
GCTGATAAAT CACTCATATC AAATAGTACC TACAAGTTAT ATCGATTAGA GGGTCGTGAT
GAAATTATCT TCTATCCAGA AAGGGTCGGG ATTAATGAAA CGAAGGTAGA GCCTAAGTTG
TATGTCCTTA AATGGCAATC TGATATTAAT GATTTTGTGG TTTTTCAAGA AATAGTTATC
CCTGAAAGAG TTGACTCGAC TAAATTTAGT GGTGTTAAAA CCATATATAC AATTAATGAT
GGGAAAGAGC TTATAGTAGG TAGTGATATG CTTCTGCATT ATCAATACTC ACCAGATGAT
AATAAATTTG TTCTGTCAAA AATGAAGAAT AGTGTTAGTT ATCCCAAAGA AGCTATTTAT
TTAAAGAGTG AAAATTATTT TATTGAACGC TCTGGAAGAA ATTCTTATGT GTTTGATGAT
GAAGAAAAGT ATTTTTATAA GTCTTCCCAG GTGTATGCTA TTGCAGATGG TTGGTTTCAG
CTCACTGATG ACAAGAAAGG TTTTTTCGTT AACTTAATGT CACCTAATAT TACAACGTTT
ACCCTCTCTA ACCCTAACCC TCTTATATAT AAAGGTGGTT TACCTAAAGG CTCTATTCCA
GCTGTTCAAG ATGTTCCTTT GGCGATAAAT ATTAAGAAGC ATTTTCTAAA TGGAAACAAC
CTTGTGGTTA CCGGTTTTCA AACTGAATAT TTACATGAAA GATTGATTTG GGATGGTGAA
TATATTCGTG GGACTTTTAC TAATGAAGAT ATGTTTGCCT CAAAAAATTT AATTGATCCA
ACACCAGCCA GTCCCATTCA AGTGAGAGTG AATATTCCTC CATTATCTAC AGAGATCTTT
TATATTACAC CGACTAACGT TAACGATGCT CCTATGTTAA CTGCGGAGAT TGGTATTCAG
TATCTTGAAA AGGATCAACA GTATTACGGT GTGCTTTCAG GAATTGTCGT CGATCCTGAT
AGAGAGGCTG TGACTTATAC ATATAAGAAT GTACCTAATG GATTAATAGC TAGTGAGGAT
GGAATATTCC ACGGTGCAGT TAAGACTAAA GGTCAATACT TGATGACGGT CACCGCAACA
GACCCTTCAG GTGCAGAGTT GACGTTTGAT GTGACATTTA TCGTTAATGA TACTGGTGAA
CCTGAAAAAT CATCCGAAGG CGGTGGTGGG ATTATGGATT TCACATTGTT GATGCTATTG
ATTACGTTGT TTTTTAGGCG TTTAAAGCAT AATTAA
|
|---|
| Protein sequence | MYRSVLVILS IISVSAIAVE SPYSIDKTYE NNLPKSSLKV AFSEANNEIL ISGTASDEFS
ADKRIYLWKY NVDNNGVDYI SSASFGIASD LVGYINVEPI GEYNKNYYAL SESNYDGARK
LVRFTLEGNE LSLSQEVEFS SSSGQYGSYV EQIEFVNNNT IVALHPNHDD TLSGKVSYDY
SVCNLSGNGE IDSCERKKIL ADKSLISNST YKLYRLEGRD EIIFYPERVG INETKVEPKL
YVLKWQSDIN DFVVFQEIVI PERVDSTKFS GVKTIYTIND GKELIVGSDM LLHYQYSPDD
NKFVLSKMKN SVSYPKEAIY LKSENYFIER SGRNSYVFDD EEKYFYKSSQ VYAIADGWFQ
LTDDKKGFFV NLMSPNITTF TLSNPNPLIY KGGLPKGSIP AVQDVPLAIN IKKHFLNGNN
LVVTGFQTEY LHERLIWDGE YIRGTFTNED MFASKNLIDP TPASPIQVRV NIPPLSTEIF
YITPTNVNDA PMLTAEIGIQ YLEKDQQYYG VLSGIVVDPD REAVTYTYKN VPNGLIASED
GIFHGAVKTK GQYLMTVTAT DPSGAELTFD VTFIVNDTGE PEKSSEGGGG IMDFTLLMLL
ITLFFRRLKH N
|
|---|
| |