Gene Shewmr4_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0804 
Symbol 
ID4250648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp939939 
End bp940484 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content48% 
IMG OID638117367 
Producthypothetical protein 
Protein accessionYP_732941 
Protein GI113969148 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.445531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC AAATCCTACT TGCCTGTATT TATCTTGCGG TGTTTCTCTT TTTGCAGCGT 
GCCTTAACTC AATGGGTGAA AAAACTCTCA TTGATGAAGC AGGTGAGTGC CGCCCGTACC
AGCCTTGTCA CTCGGTTTAT TTCCTATGTG ATGTTTTTTA TCACTTTGTC TTTGATGGCG
GTGTCCCTCG GTTTGGGTTA TCAGGACGTG TCGCTGTTCG TCTCCTCCGC GTTTGCGGTG
ATGGGCGTCG CCTTAGTCGC TCAGTGGTCG ATACTGAGCA ATTTAACCGC TGGTGTGCTG
ATTTTCTTTG TGTTCCCCTA TCGGATTGGT GAACGTATTC GGGTGGTGGA TAAGGATGAA
GATATTAGCG GAGTGATTAT TGAAATCGCG CTATTTCATG TACTTATTCT TAGGGATAAT
GGCGATACCA TCACTTATCC CAACAATTTG ATGTTGCAAA AGGCGGTGTT AAAGCTGGCG
GATCAAGCGC CGCTCGCCGA GCGCCAAGCG CTGCAGGAGG GGAAAAAGCG CTTTGATCTC
GAGTAG
 
Protein sequence
MTNQILLACI YLAVFLFLQR ALTQWVKKLS LMKQVSAART SLVTRFISYV MFFITLSLMA 
VSLGLGYQDV SLFVSSAFAV MGVALVAQWS ILSNLTAGVL IFFVFPYRIG ERIRVVDKDE
DISGVIIEIA LFHVLILRDN GDTITYPNNL MLQKAVLKLA DQAPLAERQA LQEGKKRFDL
E