| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0773 |
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| Symbol | |
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| ID | 4251495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 898768 |
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| End bp | 900762 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117336 |
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| Product | transketolase |
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| Protein accession | YP_732910 |
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| Protein GI | 113969117 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0232346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC GTAAAGTACT CGCCAACGCA ATCCGTGCGT TAAGTATGGA TGCAGTTCAA
AAAGCAAACT CAGGCCACCC TGGCGCCCCA ATGGGCATGG CAGATATTGC TGAAGTGCTG
TGGAATGATT TCCTTAAGCA CAATCCGAAC AATCCGAAAT GGGTAGATAG AGATCGTTTT
ATCCTCTCTA ACGGTCACGG ATCTATGCTG ATCTACTCTT TATTACACCT GACTGGCTAC
GACCTGCCTA TCGATGAACT GAAGCAATTC CGTCAGTTAC ATTCAAAAAC TCCGGGTCAC
CCAGAATACG GTTACACCCC AGGTGTTGAA ACCACCACTG GCCCATTAGG GGCGGGGATC
AGCAACGCTG TGGGTATGGC GATTGCAGAA AAAACCTTAG CGGCACAGTT TAACCGTGAA
GGTCACGAGA TTGTTGACCA CTACACTTAC TGCTTCCTCG GCGATGGCTG CTTGATGGAA
GGTATTTCCC ACGAGGCTTG TTCTCTTGCT GGTACCTTAG GCCTAGGCAA ACTGATCGCA
TTTTGGGATG ACAACGGCAT CTCTATCGAC GGTCATGTTG AAGGCTGGTT TACCGATGAC
ACGCCAAAAC GTTTCGAATC ATACGGCTGG CATGTGATTG CTAACGTTGA TGGTCACGAT
AGCGATGCGA TTCGCGCGGC TATCGAAGCG GCAAAAGCGG TGACCGACAA GCCAACCATG
ATCTGCTGCA AAACCATTAT CGGTTTTGGT TCTCCAAACA AATCTGGTAG CCACGATTGC
CACGGCGCAC CATTAGGTGA TGCCGAAATC GCAGCGGCCC GTGAATTCTT AGGCTGGTCA
CATGCGCCAT TCGAAATCCC TGCCGACGTA TACGCAGGTT GGGATGCTAA AGAAGCCGGT
AACGCCCGTG AAGCCGCATG GAACGACAAG TTTGCCGCTT ACGCGAAAGC TTACCCAGAA
CTGGCTGCCG AATACGAGCG CCGTGTTCTG AAAGGTGAAT TACCAGCAGA TTTTGAAGCC
AAAGCACAAG CCTTTATCCA AGAATGCCAA GCGAAAGGCG AAGGCATTGC GAGCCGTAAA
GCGTCACAAA ACGCGATTGC AGCCTTCGGT GCAGTTCTGC CTGAACTGTT AGGCGGCAGT
GCTGACTTAG CGGGTTCTAA CCTGACCCTG TGGGCAGGTT CTAAAGGTAT TCAAGAAGAT
CCAGCGGGTA ACTACGTGTA CTACGGTGTG CGTGAGTTCG GTATGAGCGG CATCATGAAC
GGTGTGTCAC TCCACGGTGG TTTCATCAAC TACGGCGCGA CTTTCATGAT GTTCATGGAA
TACGCACGTA ACGCAGTACG TATGTCTGCG CTGATGGGCA TTCAAAACAT CTTCGTTTAT
ACCCATGACT CTATCGGTCA AGGTGAAGAT GGTCCAACTC ACCAACCAGT TGAGCAATTA
GCTAACCTGC GTATGACGCC AAACATGGCG GTATGGCGTC CATGTGACGC GGCTGAAACC
GCAGTGGCTT GGAAAGCGGC TATCGAACGT CGTCATGCAC CAACATCGCT AGTATTCAGC
CGTCAAAACC TGAAGGCTCA AGTACGTACT GCTGAGCAAT TAGCGAATGT GGCAAAAGGC
GCTTACGTAC TGCAAGACTG TGCAGGTACG CCTGAGTACA TCCTGATTGC GACCGGTAGT
GAAGTGCAAT TAGCGGTAGA AGCTGCAGCT GCGCTGACCG AACAAGGCAA ACAAGTTCGC
GTTGTTTCTA TGCCATCAAA CACTGAGTTT GATAAGCAAG ATGCCGCTTA CAAAGAATCT
GTACTGCCAA AAGCTGTGAC TAAGCGTATC GCTATCGAAG CGGCCCATAC TGACTTCTGG
TACAAGTATG TTGGTTTCGA AGGCACTGTT GTTGGCATGA CCACTTTCGG TGAGTCTGCG
CCAGGCAACG TGCTGCTGAA GCACTTCGGT TTCACCGTTG AAAATGTGCT GAATGCTGCA
AAATCACTAG GCTAA
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| Protein sequence | MSSRKVLANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WNDFLKHNPN NPKWVDRDRF
ILSNGHGSML IYSLLHLTGY DLPIDELKQF RQLHSKTPGH PEYGYTPGVE TTTGPLGAGI
SNAVGMAIAE KTLAAQFNRE GHEIVDHYTY CFLGDGCLME GISHEACSLA GTLGLGKLIA
FWDDNGISID GHVEGWFTDD TPKRFESYGW HVIANVDGHD SDAIRAAIEA AKAVTDKPTM
ICCKTIIGFG SPNKSGSHDC HGAPLGDAEI AAAREFLGWS HAPFEIPADV YAGWDAKEAG
NAREAAWNDK FAAYAKAYPE LAAEYERRVL KGELPADFEA KAQAFIQECQ AKGEGIASRK
ASQNAIAAFG AVLPELLGGS ADLAGSNLTL WAGSKGIQED PAGNYVYYGV REFGMSGIMN
GVSLHGGFIN YGATFMMFME YARNAVRMSA LMGIQNIFVY THDSIGQGED GPTHQPVEQL
ANLRMTPNMA VWRPCDAAET AVAWKAAIER RHAPTSLVFS RQNLKAQVRT AEQLANVAKG
AYVLQDCAGT PEYILIATGS EVQLAVEAAA ALTEQGKQVR VVSMPSNTEF DKQDAAYKES
VLPKAVTKRI AIEAAHTDFW YKYVGFEGTV VGMTTFGESA PGNVLLKHFG FTVENVLNAA
KSLG
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