Gene Shewmr4_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0706 
Symbol 
ID4251147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp819427 
End bp821052 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content52% 
IMG OID638117269 
Producthypothetical protein 
Protein accessionYP_732843 
Protein GI113969050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATC TAAGACCAGC TTTAGGCAAC AAGGAACACG GCGCGGTACT GCTTATCGTC 
TTGGTCTTCA GTCTGTTAGC GAGTTTGCTG GTGGTCACCT CGCTCAGGGA TAATCTAGTG
CAAGAGCGAC TGAGCGGTAA CTTTCAAAAG CAGGTCAATG CGCAGCTACT CGCCGAACAG
GGGATGCACG AGAGCTACAA CCAACTCAAG ACTCAGCTAC AGCGCGCGCC TAATCAAGGC
CTGCAAACCC TTTATGAGCA ACTCCCCGCC GAAGCCGATG GCAGCCTCGA AGGCAGCAGC
TATGCCCTCG AAAACGGCCA AATCGCCGGG GCCGATCTTA GCCTCGACAG TCGTGGCAAT
CATTTAGAAG GCGAGGCCAA ACTCAATGCC CAGTTCACAC TGCAGGGCAG TCACGGAAAC
ACAATTTTCA ATGATGCGAT TGTGTCCTGC GAGAGCTTAA ATTTAACCGG CAGCAGTAGC
ATCGATGGCT ACGATTCCCG TAAAGGCGCC TATGGCGAAA GCATCAGTAA CGGCCAAGGT
GGCAGTGAGC TTAATCAACA CGGCAAAGGC AATGTCACGA CCATAGAGCC CAATGCCAAT
ATTACGCTCA CGGGTAGCGC GCCGATTTAT GGCGATGTCA GTGCCACCGG CAGCGTAACC
CTCACGGGTT CGGCGGATAT TCATGGCAGC ATTCAGGCCA ATAATGATGT CACCCTAGGC
GCGGGGACCA TCAGTGGAAA TATCGCAGCG GGTAATAACT TTAACTTGGC CAATAGCGGC
ACGGTGGAAG GCTCAGTCAA AGCCAATAAC AATGCCGCCA CGGCGCCCAA AGCCCAAGTG
AATGGCACAC TGCAATATGG TGGCGACGGT AACTTCCATC AAGATAGTCA GATTGGTAAC
TTAGTCAACG CGCGCCCCAA CTTGCCCCCC TTGCCCGCAA AATCCTGCGA TCCATTGGAT
ATAGGCGCTG TGATGGGCGG CTTTAAGATG CCCAATAACG GCGCACGGAC CATTGATTCC
AACGCTAATG TCACTATCAC GCCAACGGGG TCGAGTAAGA CCGAACTCGG CTGGAAAGGT
GATTATTTCC CCAGCCTAAC CCCCACATCA GAAAACATTT TCGGCAGTGA AACGCCAGTA
TATAACCTCG ATAGCTTAAT CATGAGTGCC GATGGGGTAC TCAATATCAG TGGTGGCGAT
GTCACCCTGA TAGTCAATGG TGACTTTAAG ATGAGTGGCT CGAATCAGCT AAATATTGCC
CCAGGCTCGA GCCTTACCCT GTTTGTTGGC GGTGAGGTCG CCTTTACGGC GGGGACAAAT
AACGGCAATA ACATTAAAGG GCAAACCCTG ACCGACAGCA ACAAGCCGCC ACTGTCTATT
TTTTCTGGTT CGGATAAGGA TGTGACTGTT AGCGGTAACG TGCCAATTTA CGCCGCGCTC
TACGCACCCA AATCTAAGGT CAATCTCCCC GGCGGCCCTG AGATTTTCGG CTCGGTGAGG
GGCAAATCCA TCACAGCGAC CGGAAATGGA AAAATCCACT ATGACAATGC CTTAGGCGCA
GCCGACTTAG GCGAAGGTAA CGCTAAGCCC GCGGTCATCC TGCTCAAGCA ATGGCAATAT
TTATAG
 
Protein sequence
MDNLRPALGN KEHGAVLLIV LVFSLLASLL VVTSLRDNLV QERLSGNFQK QVNAQLLAEQ 
GMHESYNQLK TQLQRAPNQG LQTLYEQLPA EADGSLEGSS YALENGQIAG ADLSLDSRGN
HLEGEAKLNA QFTLQGSHGN TIFNDAIVSC ESLNLTGSSS IDGYDSRKGA YGESISNGQG
GSELNQHGKG NVTTIEPNAN ITLTGSAPIY GDVSATGSVT LTGSADIHGS IQANNDVTLG
AGTISGNIAA GNNFNLANSG TVEGSVKANN NAATAPKAQV NGTLQYGGDG NFHQDSQIGN
LVNARPNLPP LPAKSCDPLD IGAVMGGFKM PNNGARTIDS NANVTITPTG SSKTELGWKG
DYFPSLTPTS ENIFGSETPV YNLDSLIMSA DGVLNISGGD VTLIVNGDFK MSGSNQLNIA
PGSSLTLFVG GEVAFTAGTN NGNNIKGQTL TDSNKPPLSI FSGSDKDVTV SGNVPIYAAL
YAPKSKVNLP GGPEIFGSVR GKSITATGNG KIHYDNALGA ADLGEGNAKP AVILLKQWQY
L