| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0696 |
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| Symbol | |
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| ID | 4251540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 803988 |
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| End bp | 808541 |
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| Gene Length | 4554 bp |
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| Protein Length | 1517 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117259 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_732833 |
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| Protein GI | 113969040 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00313412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.624889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA ATAATCAGCC CACACACATG ACTCAAGCCC AAACGCCCGA TCCGCTTTTT
TTACAAGCCG AGCATTTGGC AAAAGATTTT TCTCTGTTTC CTAAACACAG TAAACAGAGC
TTATCAGATG AAATTAAAGG TCTTTTAAAC GATGACGCCA TTCAGGCAAA TTTAAAAGAC
TTGGCATCTT TAGATGTCGA TGGTTACGTC GCAAAAGTGA TCCAGCCGAC CCAAGATAAA
GGTCGTCCTG GTGCAAAACG TATCATTGCT GACCTAAAAG GTCGCTTGAT TACCGAAACT
CACTTGGGTT CTTTCTACAG CGCTGAGGTC GAGCTGAATT TCGGTTCACG CACTCGTCGT
ATCGGTTTTA TTGCCCAAGA GCGTACCACG GCTAACGGCG CGTGGATGCC TGAACATCAC
TATGCGGCCT GTAAAGCGAT TCGTCATTTC GCCGAATTGT CTATGCCTAT CGTTTATCTC
ATCGACACCC CTGGGGCCGA TGCGGGCGAA GTGGCTAACA GCCAAAACCA AGCACATTCT
ATTTCTAAGG CGATTGCTGA GAGTGCCAAC GTTGACGTGC CAACAGTCGG TATCGTTATC
GGTGCGGGTT ACTCGGGCGG TGCGATTCCA TTAGCGGCGG CCAACATCCT GTTATCGCTG
CGCGATGGTA TTTTCAACAC GATTCAGCCA CAAGGTCTGC AGAGTATTGC GCGTAAGTAC
AACCTGTCAT GGCAGGAATG TGCTAAGTCT GTGGGCGTGT CTCCAGAAGA GCTATACACC
GCGGGTTGTA TCGATGGCAT CATCGATTTC TCTCCTGGTG ACCGTGACGA GCGTCAGCAC
AACTTACGCC GCGCTATCAT CAGCAGTATC GAAGCTGTTG AACGTGCAGC CATCAACTTT
GTGCGTGAAT CTAAAGATTT ACGTGAGCAC TATGACCGCA GTTTAGCGCG CTTCCTCAGC
CCATCTAAAA ACCTGATGGC GTTAGAGTTA AACGCAGAAT TGGCCGTGGC AACTAGCCCG
ACCAACCATC ACAACCTGTT TGGTAGTGCT TACCGTTACC TGCGTTATTT AACGCTGCGT
AGCCGCATTC ATTCAATCTC TCAGGAGCAA TACGGACGTC TGTCACGTGT TAGCGTGCCT
GAAGGTGACT TGTTAGCTCG TATCCAGCAA GAGCAAGACC GTGTATTCCA AGCTTGGTTA
TCAAGCCCTG ATAAGCTGGT TTACGATGAA GATCTAAACA AGCTGTGGGC GAACTTTATT
GCTAAGCGCG ATGAAGTGTC TACCGAGCGT AACATGCTGA CTCGTTTGAT TTTGGGTGAA
CCAAAAGAGA ACTACAAAAA AGCACGTAAG GCGCTGTTAT TTAACATCGG TTGGTCTTTA
TATCACCGCT GGAAGAGCAA TGCGGCAAAC AACTTCAAGG GCTTAATCCA GCACCTTGAA
AATCTGCCAA AGTCAGTGAC TCAAGCCAAG TGGCCTGAAC TGAATCAACT GACTGTGCTC
GATGTGGTTG TGAACGACGA ACTGCGTGAA GACTTCATTT GGCAATGTCA TAACATCCTG
ATCTTTAACT CACTGTACGA CAACGTTGTG GGCAGCTTAG CGTCTATCGC GAAAGAAGCC
ATGATGTCTA AGAGCCTGTC TCGTAACTCA GTGAACAACC TGCTGCACAA GTCAATTGAC
CATGCGCTGT CGACTCAGGA TACCGCTAAC GACAAGGCGA AATTCTACAA GTGGCTTAAG
TACTTTATGG GCCAATCTAA CCGTGCCGAT CTCTTGGTGC GTGTAGAGCA GTGGAAGAGT
GTGGGGTTCC CACAACTTAA CGACAGTTTA TTCGTTATCC TGACTTACTT CTTCGAGCGT
TTACTGCCTG AATACTTCGA CAGTGAAAGC GATAACAGCA AGTACACTGG CGCGATTAAC
CCTGTGCGTA TCGGTCGTCG TAAGGACTTC TGGAACCGCT TGACCATGGG TTATCAGGAC
TTACTGATCC AAAAAGTATT ACGTGACGAA AAACGTACCG GCAAGATGAC GTGGGAAAAT
GTGATTAAGC AATTTTTCAC TCATTTTGAA GAGATCAATG GCGACAAAAT GTCGGCCAAC
TTGCTTAACT TCCCTGGTTT CCGTCTCTCA ATCGAAGATG CGTTAGACAA AGGCATTCGT
CCTTGCGGTC TGATCACAGG TATTGCTGAC TTTAAAGAAA AAGGTCAAAA AGTCCGTGTG
GGTGTGGCTG TGTCTAACAC TGCATTCCAA GCGGGGGCCT TCGATATGGC GAGTGCTGAG
AAATTCTCTG CGCTGCTGAT CGAGTGTGCT AAGCGTAAGC TACCTGTTGT TTGCTTTATC
AGCTCAGGCG GTATGCAGAC TAAAGAAGGT GCTGCGGCAC TGTTCTCTAT GGCTGTTGTG
AACGACCGTA TCACTCGTTT CATCCGTGAT AACGAATTGC CAGTACTGAT GTTCGGTTTT
GGTGACTGTA CTGGTGGTGC GCAGGCGAGT TTCGTGACTC ACCCATTAGT GCAAACCTAT
TACCTGTCTG GTACTAACAT GCCATTCGCG GGTCAAATGG TGGTGCCAGC TTACTTGCCT
TCGACTTCGA CACTGTCTAA CTACTTGTCG AAAGTACCAG GTGCAATGGC GGGCTTAGTC
CACAACCCAT TCAGCGAAAC CTTAGATAAC CAATTGGCGA GCATCGATCC TCTGATGCCA
ATGCCAACGG CGAAGATCAG TGACGTGATC ATCAACGCCC TATCAACACT GGTTGTTGAA
GCGCCTGTTG AAGAAGAAGT GATTGTTCAA AACGATCCAC GTAAGTTAAT GAAACCAATT
AACAAAGTAT TGGTTCATGC CCGTGGTTGT ACCGCTGTTA AGTTGATCCG TAAGGCTCAC
GATAACGATA TCAACGTGGT ATTAGTGGCG TCAGATCCTG ACATGACCGC CGTACCTGCG
GATATGCTGA AAGACTCAGA CAAGTTAGTC TGCTTAGGTG GTAACACCTC TGACGAAAGT
TACCTGAACG CTTACTCAGT GCTCAAAGTG GCCGAATACG AGCAAGTTGA TGCACTGCAC
CCAGGTATCG GCTTCCTGTC TGAAAGCCCA CAATTTGCGG CATTGTGTGT GAACAATGGG
GTTAACTTCG TTGGTCCTAG CGTGCATTCA ATGACGACTA TGGGTAACAA GTCGAACGCG
ATTAAGACAT CACAAAGCCA AAACGTGCCA GTAGTACCAG GTTCACACGG TATTCTGACG
AACGCTGAGC AAGCAGTGAA CGTGGCCAAT GAAATTGGTT ACCCTGTGCT GCTCAAAGCG
GTACAAGGCG GTGGCGGTAA AGGTATCCAG GTCGTTAAAC GCCCTGAGGA TATGATTGGT
TTATTCCAAA AGACCTCTAC CGAAGCGGCT GCGGCCTTTG GTAACGGCGA CTTGTACTTA
GAGAAATATG TAACGTCACT GCGTCATATC GAAGTGCAGT TACTGCGTGA CAAGTTTGGT
AACGCTAAGG TTCTGGGTTT ACGTGACTGT TCTGTACAAC GTAACAACCA GAAAGTGGTC
GAAGAGTCTG GTTCAACCAT GCTGCCAGAA GAACTGAAGA AACAAGTGCT GGCTTACACC
CGTGCTTTAG GTGATGCGAC CGATTATATG GGCGCAGGTA CAGTTGAGTT CATCTATAAC
TTAGATGCGA ACGAAGTGTA CTTCATGGAA ATGAACACCC GTCTGCAGGT AGAGCATCCA
GTTACTGAAG CGACTTCAGG TATCGATATC GTGAGCGCGC AGTTTGATAT CGCTGCGGGT
CGTTCAATCG AGAACCTAGA GCCGAAAGAA ATTGGTTATG CGATGGAAGT GCGTGTGACT
GCAGAAAAAG CAGCACTGGA CAGCCATGGT GTACTCCAAC TTATCCCAAA TCCTGGCAAG
ATCACCGAAT GTGTATTCCC TGATCATCCA GATGTGGAAA TCATCTCGAT TGCCGCCGCG
GGTAAAGAAG TATCACCATA CTACGACAGC TTAATCGCTC AGGTGATTAT GCGCGGTGAA
AACCGTGAAG ACGTTATCGC GAAACTGCAC GCTTACTTAG ACAGCGTAGT GCTTAAAGGT
ATCGCGACTA ACATTCCATT GCTGAAACTG ATCCTAAGTG ATGGCACCTT CAAAGAAGGC
GTATACGACA CTAACTACCT GCCACGTTTC ATGGCTGAGC TAGATATTCC AGCGCTGATC
GCTGAAATGG AAGCCGCTGC TGAAACCGTG GGTGTAGACA CTGAGTCACT GCGTGTCGGT
GAAAGTAACG AACTGAAAGT ATTAGCCCAA GGCGCAGGTA TCTTCTATAC CTCTCCAGCC
CCTGGCGAAC CTGACTTCGT GAAAGAAGGC GATATTGTTA CTGCAGATCA AACGCTTGCG
TTAACTGAAG CGATGAAGAT GTTCTCTCAG GTCAACTTAG CCGGCTTCAA CCGTCAAGGT
GCAGTGCTGT ACCCTGAAGA TAAGAAGTAC CGCATCGAGC GTATTCTGAA CAGCAATGGT
CAGCAAGTAT CGCAAGGTGA CTTACTCTTC GTGGTATCGC CAGTAGAAGA TTAA
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| Protein sequence | MTSNNQPTHM TQAQTPDPLF LQAEHLAKDF SLFPKHSKQS LSDEIKGLLN DDAIQANLKD
LASLDVDGYV AKVIQPTQDK GRPGAKRIIA DLKGRLITET HLGSFYSAEV ELNFGSRTRR
IGFIAQERTT ANGAWMPEHH YAACKAIRHF AELSMPIVYL IDTPGADAGE VANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT AGCIDGIIDF SPGDRDERQH NLRRAIISSI EAVERAAINF
VRESKDLREH YDRSLARFLS PSKNLMALEL NAELAVATSP TNHHNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSRVSVP EGDLLARIQQ EQDRVFQAWL SSPDKLVYDE DLNKLWANFI
AKRDEVSTER NMLTRLILGE PKENYKKARK ALLFNIGWSL YHRWKSNAAN NFKGLIQHLE
NLPKSVTQAK WPELNQLTVL DVVVNDELRE DFIWQCHNIL IFNSLYDNVV GSLASIAKEA
MMSKSLSRNS VNNLLHKSID HALSTQDTAN DKAKFYKWLK YFMGQSNRAD LLVRVEQWKS
VGFPQLNDSL FVILTYFFER LLPEYFDSES DNSKYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRTGKMTWEN VIKQFFTHFE EINGDKMSAN LLNFPGFRLS IEDALDKGIR
PCGLITGIAD FKEKGQKVRV GVAVSNTAFQ AGAFDMASAE KFSALLIECA KRKLPVVCFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STSTLSNYLS KVPGAMAGLV HNPFSETLDN QLASIDPLMP
MPTAKISDVI INALSTLVVE APVEEEVIVQ NDPRKLMKPI NKVLVHARGC TAVKLIRKAH
DNDINVVLVA SDPDMTAVPA DMLKDSDKLV CLGGNTSDES YLNAYSVLKV AEYEQVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQSQNVP VVPGSHGILT
NAEQAVNVAN EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIG LFQKTSTEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG NAKVLGLRDC SVQRNNQKVV EESGSTMLPE ELKKQVLAYT
RALGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIENLEPKE IGYAMEVRVT AEKAALDSHG VLQLIPNPGK ITECVFPDHP DVEIISIAAA
GKEVSPYYDS LIAQVIMRGE NREDVIAKLH AYLDSVVLKG IATNIPLLKL ILSDGTFKEG
VYDTNYLPRF MAELDIPALI AEMEAAAETV GVDTESLRVG ESNELKVLAQ GAGIFYTSPA
PGEPDFVKEG DIVTADQTLA LTEAMKMFSQ VNLAGFNRQG AVLYPEDKKY RIERILNSNG
QQVSQGDLLF VVSPVED
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