| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0516 |
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| Symbol | |
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| ID | 4251639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 593938 |
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| End bp | 595308 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638117075 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_732653 |
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| Protein GI | 113968860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA CCATTATCGC CCAGACCTTG TTCGGCCTGT TTAGCGCACT TGTGCTAATC
GGCGGACAGG TAAACTCTGC TGTTGCAGCA ACCCCAGCCC TAGAAGCCAA AGCGCTTAAG
GGCGATTCAG TCGCCGCATC GGTTGAATTG GCACCAGATA ACCTATTAGC CCCTGAGACT
CAGGCATCAC TCAATCAGTG GTTACCTGAG TTACTCAAGC AAATTAATCA GTTGCCTGAA
GTGCAGGCAC AAATAGCCAG GCAGCAACAG GCGGAGCTGG CCATAGCCGC AGCGGATCGC
GCCGTCTATA ACCCTGAGCT TGGACTCAAT TACCAAAATG CTGACACAGA TACCTACAGC
CTGGGGCTCA GCCAAACCAT AGACTGGGGT GATAAGCGTG GCGTGGCGAC CCGCCTTGCC
CAGCTTGAGG CGCAAATCCT GTTAGCAGAC ATTAGCTTAG AGCGCAGCCA AATGTTGGCC
GAGCGGCTAT TGGCACTGGC TGAGCAGGCG CAGAGCAATA AGGCGCTCAC CTTCGCCGAG
CAGCAATTAA GGTTTACGCA GGCACAGCTC AATATTGCCG AGCAGCGCTT TGCTGCCGGG
GATCTATCCG ATGTTGAGTT GCAACTGCTA AAGCTCGAAC TGGCGAGTAA CACCGCCGAC
TATGCGATGG CCGAGCAAGC CGCCTTGGTG GCCGATGGCA AAGTGATCGA GTTACTCGGG
GTCGACAAGC TCAAGTTTAA GGAGTTTATC CCCGAGATTG GCCAATTGGT GTCTAAGATG
TCCCCGAAAG CAGATTTACC CGCCTTGACC AGCGCCCATC AACAGGTGTT GCTGGCCAAG
GCCAATGCCA TCAAGGTTAA GGCGGACACG GCGGCCGATC CCACCATCAA CCTAGGTGTT
GAAAAGGAAG GCGATGACAA CAAGCTGGGT ATCGGCGTGG CAATCCCTTT GCAGGTGCGG
AATAACTACA GCGAGTTACA GTCGGTTGCC GACAAGGGCA TCGCTATCGC GGAGCAGGAC
TACTTAGCCC GTGAGCGAGT ACTTACGGCC AAACAGGCAC AATTTGTCAA TGCTTTACCT
CGTTTACTGG CGCGCTACCA AGATTGGCGT GAGCGAGTCG AAGCCTCGGG GGGCAAAGCC
GCTAAATCCT TAAGTGAGCT TTGGCGCTCG GGGGATGTGA GTACTAGCGA GTATTTGCAG
AGTCGGCGAC AACTCGCTGC CAGCTATTTG GTCGGTTTAA ACCTCGAAAC GGCAATTTAT
CAGAGTTGGT TAACTTGGAT GGGGGACAGC GGTCAGCTGC TGTCCGTGAT CGACAATTTA
GCCGACAAAT CAGCGTCCAT TTCTTCTACA AATGCCGTGC CAGCAGAGTA A
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| Protein sequence | MKKTIIAQTL FGLFSALVLI GGQVNSAVAA TPALEAKALK GDSVAASVEL APDNLLAPET
QASLNQWLPE LLKQINQLPE VQAQIARQQQ AELAIAAADR AVYNPELGLN YQNADTDTYS
LGLSQTIDWG DKRGVATRLA QLEAQILLAD ISLERSQMLA ERLLALAEQA QSNKALTFAE
QQLRFTQAQL NIAEQRFAAG DLSDVELQLL KLELASNTAD YAMAEQAALV ADGKVIELLG
VDKLKFKEFI PEIGQLVSKM SPKADLPALT SAHQQVLLAK ANAIKVKADT AADPTINLGV
EKEGDDNKLG IGVAIPLQVR NNYSELQSVA DKGIAIAEQD YLARERVLTA KQAQFVNALP
RLLARYQDWR ERVEASGGKA AKSLSELWRS GDVSTSEYLQ SRRQLAASYL VGLNLETAIY
QSWLTWMGDS GQLLSVIDNL ADKSASISST NAVPAE
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