| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0498 |
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| Symbol | |
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| ID | 4251744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 569518 |
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| End bp | 570801 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117057 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_732635 |
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| Protein GI | 113968842 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAA TCACTTCATA CCTAATGTTA GATGAACAGG CCAAAGAGCT TGTTGACCTT
GTTCATGGAA CCCAGATCGG CCTGACTTTT TCAGAAACCG CCGTACTTGT ATTGCTGTTA
TCTGCCCCGA ACGCGATTTT TACCAAGGAA GAATTGCTGC AAGTCGGCTG GCCAGAACGT
GTGGTCGCGC CTACCTCATT AACCCAGTGC ATCAGTACCT TACGTAAAAA GTTAGAGCCT
TATACCGAAG TGCAGCTCAA AACGGTGGCG CGCCGCGGTT ATCAGTTGCA TGTGTCCGAA
CAGTCCCATG TGAAGATGTT GGCAATTAAC GATGCCGATG CGATCCGCGA TGCCATTGTC
GGTGTCTCGG CGTGGACGAA ACTGGCAGGC ATCGTCATGC TGGGGTTAAT CCTTATCTCT
GTGTGGTACT GGAGCGATCA CCATGCCGTG GTCAAACAGG TCGCAAAATG GAACGCCGAT
AAATATATCA GCCTCAATAT TGGCGGTACC TTGGGCACGG CACAGGTGCT GTATATCGAC
GACGAAGAAC ATTTACATCC CTCGTGGTGG CAAAAGCATC TAGCGCCAGA AGGTAACCAT
ATCAGCGGCT TGCCTTATTT CAGCGCCTTC GCCGCAACGG ATGGTAAAAA CTATTCGATG
GCTATTTGCC CCTCGCTCGA TGCCAAGGAT TGTAACGGCA AGGGCATCAT CAATATCACC
TCGATTGATG CAACGCCGGT GGGCCTTAAC ATGGCCGAGT TTATCCCGCT GAGTAAGACG
ATGGAGGAGC GTATTCGCTA CAACCGCATC GTGCTGCCGA TTGATGACAA GGGGGCGGGG
GAGCTGCTGG AGCATAACTA CCACGCGGAT ATATATTTCC CAGTGGCGGG CGAGCTGCTG
GTGCGTACGG ATCTCAGCAT GTCGCTGGTG TACGAAGGGG AGAATCGGGG CAAGTTTTAC
TCCACCTCCT GCATTACCGA TCAGGACTGT TTAACCACGC CGATTAAGTA CACTATCCGT
GGGGAGTTTG AGCAGTATCA AACGCAAATT GATGATCTGA ATGTGGATGT ATTCCATGTC
AAAGTGTCGC AAAAAGAGCT CACCAAACCC GATGAGGTGA GTGGCTCTGC CATGCAGTTT
TACCGCGCGA TCCGTAAGCA CGATATTCGC GATGAAGATC TGTTTTACTA TCGGGTTTAT
CAAAATAAGG GCACGGCGGT GTGGATAGTC CCACAAATGG GACAACTGCT GGCCTGGACT
CAGTACACTC AAGTCAAACT CTAA
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| Protein sequence | MHKITSYLML DEQAKELVDL VHGTQIGLTF SETAVLVLLL SAPNAIFTKE ELLQVGWPER
VVAPTSLTQC ISTLRKKLEP YTEVQLKTVA RRGYQLHVSE QSHVKMLAIN DADAIRDAIV
GVSAWTKLAG IVMLGLILIS VWYWSDHHAV VKQVAKWNAD KYISLNIGGT LGTAQVLYID
DEEHLHPSWW QKHLAPEGNH ISGLPYFSAF AATDGKNYSM AICPSLDAKD CNGKGIINIT
SIDATPVGLN MAEFIPLSKT MEERIRYNRI VLPIDDKGAG ELLEHNYHAD IYFPVAGELL
VRTDLSMSLV YEGENRGKFY STSCITDQDC LTTPIKYTIR GEFEQYQTQI DDLNVDVFHV
KVSQKELTKP DEVSGSAMQF YRAIRKHDIR DEDLFYYRVY QNKGTAVWIV PQMGQLLAWT
QYTQVKL
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