Gene Shewmr4_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0492 
Symbol 
ID4250916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp563826 
End bp564533 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID638117051 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_732629 
Protein GI113968836 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAA ATATAGAGAG ACGGAGGTTC CTTAAAAGCG CTGGCATGTG CTCTTTGATG 
TTAACGCCTT TAGCCGGGTG TTCGGTCAAA GAAGAGTCCG ACGGCGCCCA TAAGCCCCAT
TACGTCATGG TCTTTGACCA AAACAAGTGT GTCGGCTGTG GCGACTGTAA AACCGCCTGT
AATCAAGCCA ACCATTTACC TGAAGGCAAG TCACGGGTGT TGCTCGAGCA GCAGAGTGGC
CGTGTCGAAG GTCAGCCTTG TCCGCACTGC GGCAAGATGA GTTGTGACTG TGAACGTAAG
TTTGTGCGGG TTTCCTGCCA GCAGTGCAAG AACGCCCCCT GTGTGACCGT TTGTCCTACG
GGCGCGGCGC ACCGCGATGC GAAAACGGGC ATTGTGACTA TGGACGCGAG CAAATGCGCC
GGCTGTAAAT ACTGCATTGG GGCTTGTCCT TACAACGCCC GTTACATCAA CAGCGATACG
GATGTGGCCG ATAACTGCGA TTTCTGTTTG AACAGCAAGT TAGCCAAGGG CGAATTACCC
GCCTGTGTGC AGAGCTGTAA ATACGATGCG CTGATCTTCG GTGATGCCAA CGATCCTCAA
TCCTACGTAA GCAAACTCTT AGCGGTAAAA GACTCAGTGC GCATTAAGCC GCAGTTTGGC
ACCGAGCCGA GCTTACGTTA CATACCAATC GTCAAACTGG GAGTGTAA
 
Protein sequence
MSENIERRRF LKSAGMCSLM LTPLAGCSVK EESDGAHKPH YVMVFDQNKC VGCGDCKTAC 
NQANHLPEGK SRVLLEQQSG RVEGQPCPHC GKMSCDCERK FVRVSCQQCK NAPCVTVCPT
GAAHRDAKTG IVTMDASKCA GCKYCIGACP YNARYINSDT DVADNCDFCL NSKLAKGELP
ACVQSCKYDA LIFGDANDPQ SYVSKLLAVK DSVRIKPQFG TEPSLRYIPI VKLGV