Gene Shewmr4_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0477 
Symbol 
ID4250901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp542631 
End bp543785 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID638117036 
Producthypothetical protein 
Protein accessionYP_732614 
Protein GI113968821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA TCCAACTTAG ACGCCAAGTT AAATACCGCA TTGCCTTTCT GGTACTGATG 
ATTGCGGTTT ATACCCTAGG CTTTCATTTG CTGCCGGAGC AGCTTACAAA CACGCGCGAA
GCCTTATCCT TAGCCGTAGT GACGGCCCTC TATTTTGTGT TGTTGCCAGT GCTTTATTGG
TATTGGATTA TCAAAATAGG TGCGCAAAAG CCGTGGAAGA TGTTGGTTGT GTTAAGTTTG
AGTAGCCTAA TGGCGAGGCT TAGCTATCCA CATGAAGTGG CTGAGTATTT CGAGTTTATC
GCTTGGCTAC GTTACCCCAT TATTGCAGTA TTACTCATTA TCGAGCTGTA CTTGATAGTA
AGTATTATTA AGGGGTTATG GCAGGCGAGA AAGGCATCTG GGGATCCAAG ATTAGCTATC
GTTGAGCAGT ATGCAGCAAT GGCGCAGTCT GAGCCGAGTG CTGAAACGAT AAAAAGGGAG
TCAATTAATC CCAAAAAGCC GTCAGAGTCT GACTTGCCGC CCATACCCGA TGAGAAGAGG
CTAACATTGG GTTTAATCCT CGCCACTGAG CCCGCCAGTT GGTATTACGC CATTCCTTAC
TTTTCCCGTC GCCACCCTGA GGCCATTGGC TCTCTCAACT TACTCAGTGC TAAGCCTTGG
CATGCTTTGG TTGTCATCGT GGGGTTAATG GCCGCCTCTG CGGTGAGCTA CAGTTTACTC
GATGGTATAA GTCATATTGC TGCTCTCTTT GTTTCAGGTT TGCTTTTGTA TTCCATCCTA
TTAATGGCGG CAAATTATCG GATCAGTCGT TATTACTCAC TTTACCAAAG GGCAGATAAG
CTCATCATTA ATAACGGTAT GTGGGGCTTT ATGGCCGTTG ATTTCACGCA GATTAGTGAA
CTGAAATTAG GGCGCTTTAG CAGTCCTGTG TCGCAGGCTT CACAGGGTGA CACCATGCCT
AGTGACGCAC CCGAAATCTT AACCCTAGGT CGCGGTGAGG CGAATGCGCA GTTGATATTT
AACCAGCCGC AAGTTTATTA CGGCGCTATG GGGCAATTAC CTGAGTCATT GACTGTGGTT
AACTTAGTCG TCGAGGACCC TCAAGCGTTA GCCGATACTT TAACCCCAAG TGTTGTGTTA
GATAAGGTAT CGTAG
 
Protein sequence
MLKIQLRRQV KYRIAFLVLM IAVYTLGFHL LPEQLTNTRE ALSLAVVTAL YFVLLPVLYW 
YWIIKIGAQK PWKMLVVLSL SSLMARLSYP HEVAEYFEFI AWLRYPIIAV LLIIELYLIV
SIIKGLWQAR KASGDPRLAI VEQYAAMAQS EPSAETIKRE SINPKKPSES DLPPIPDEKR
LTLGLILATE PASWYYAIPY FSRRHPEAIG SLNLLSAKPW HALVVIVGLM AASAVSYSLL
DGISHIAALF VSGLLLYSIL LMAANYRISR YYSLYQRADK LIINNGMWGF MAVDFTQISE
LKLGRFSSPV SQASQGDTMP SDAPEILTLG RGEANAQLIF NQPQVYYGAM GQLPESLTVV
NLVVEDPQAL ADTLTPSVVL DKVS