Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0477 |
Symbol | |
ID | 4250901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 542631 |
End bp | 543785 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117036 |
Product | hypothetical protein |
Protein accession | YP_732614 |
Protein GI | 113968821 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAA TCCAACTTAG ACGCCAAGTT AAATACCGCA TTGCCTTTCT GGTACTGATG ATTGCGGTTT ATACCCTAGG CTTTCATTTG CTGCCGGAGC AGCTTACAAA CACGCGCGAA GCCTTATCCT TAGCCGTAGT GACGGCCCTC TATTTTGTGT TGTTGCCAGT GCTTTATTGG TATTGGATTA TCAAAATAGG TGCGCAAAAG CCGTGGAAGA TGTTGGTTGT GTTAAGTTTG AGTAGCCTAA TGGCGAGGCT TAGCTATCCA CATGAAGTGG CTGAGTATTT CGAGTTTATC GCTTGGCTAC GTTACCCCAT TATTGCAGTA TTACTCATTA TCGAGCTGTA CTTGATAGTA AGTATTATTA AGGGGTTATG GCAGGCGAGA AAGGCATCTG GGGATCCAAG ATTAGCTATC GTTGAGCAGT ATGCAGCAAT GGCGCAGTCT GAGCCGAGTG CTGAAACGAT AAAAAGGGAG TCAATTAATC CCAAAAAGCC GTCAGAGTCT GACTTGCCGC CCATACCCGA TGAGAAGAGG CTAACATTGG GTTTAATCCT CGCCACTGAG CCCGCCAGTT GGTATTACGC CATTCCTTAC TTTTCCCGTC GCCACCCTGA GGCCATTGGC TCTCTCAACT TACTCAGTGC TAAGCCTTGG CATGCTTTGG TTGTCATCGT GGGGTTAATG GCCGCCTCTG CGGTGAGCTA CAGTTTACTC GATGGTATAA GTCATATTGC TGCTCTCTTT GTTTCAGGTT TGCTTTTGTA TTCCATCCTA TTAATGGCGG CAAATTATCG GATCAGTCGT TATTACTCAC TTTACCAAAG GGCAGATAAG CTCATCATTA ATAACGGTAT GTGGGGCTTT ATGGCCGTTG ATTTCACGCA GATTAGTGAA CTGAAATTAG GGCGCTTTAG CAGTCCTGTG TCGCAGGCTT CACAGGGTGA CACCATGCCT AGTGACGCAC CCGAAATCTT AACCCTAGGT CGCGGTGAGG CGAATGCGCA GTTGATATTT AACCAGCCGC AAGTTTATTA CGGCGCTATG GGGCAATTAC CTGAGTCATT GACTGTGGTT AACTTAGTCG TCGAGGACCC TCAAGCGTTA GCCGATACTT TAACCCCAAG TGTTGTGTTA GATAAGGTAT CGTAG
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Protein sequence | MLKIQLRRQV KYRIAFLVLM IAVYTLGFHL LPEQLTNTRE ALSLAVVTAL YFVLLPVLYW YWIIKIGAQK PWKMLVVLSL SSLMARLSYP HEVAEYFEFI AWLRYPIIAV LLIIELYLIV SIIKGLWQAR KASGDPRLAI VEQYAAMAQS EPSAETIKRE SINPKKPSES DLPPIPDEKR LTLGLILATE PASWYYAIPY FSRRHPEAIG SLNLLSAKPW HALVVIVGLM AASAVSYSLL DGISHIAALF VSGLLLYSIL LMAANYRISR YYSLYQRADK LIINNGMWGF MAVDFTQISE LKLGRFSSPV SQASQGDTMP SDAPEILTLG RGEANAQLIF NQPQVYYGAM GQLPESLTVV NLVVEDPQAL ADTLTPSVVL DKVS
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