| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0471 |
|---|
| Symbol | |
|---|
| ID | 4250806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 534479 |
|---|
| End bp | 536794 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638117030 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732608 |
|---|
| Protein GI | 113968815 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACG GCATTAGTAA AATAAAGACT CTTCGCTCAT TCGGCATTTA TGAGAATCAC
ATCAATGATG GTTGTGATGA GTTTGCGAAA TTTAATCTTA TCTATGGTTG GAACGGTTCA
GGTAAATCGA CGTTATCTCG ATTATTCCGT TGCATTGAAA ACAAGAAATT AGATGGTACC
AACTACACCG AATCAGCATT TGAAATCGAG TATAGCTTGG ATGGTCAAGC TCAAAGTATT
CTTACTCAAC AAAACCTTTC TCAGAATCAG CTAAACATTC GGACATTTAA TAATGATTTC
GTTCGTGAAA ACATCGACTG GAGTGGTACA GTCAAAAGTA TCCTGCTTGT TGACCAGCGA
AAAATCGAAG AACGAAAGCT GTTAGATGAA CAAAATAAAA CCCTCAAACT GAAAGAATCA
GCTTCAGAAA AAGAAGCAAA GATAGCTGAC GACCTCGATA CCGAAATAAA CAAATTTTTG
ACACGCACAG CGAAGAATAT CAAAACAAGC TTAAAACTAA TTGGGACCGA AGATAGTAAG
TATCTTAACT ACAACAAAAC CTCGCTTGAA AATTTGATTA GAACTAGCTC TGCGGAAATT
GTGGATCCTG CGTCAGTTCT TACCGATGAG CAAATCACTC TTCATACCAA GTCAGCCTCA
CCTGTCGAAA AAGATAAAAT TTCATTTGCA GCAAATACAA TCAGTCAACA TTATTTTGAG
TCAAGCTTTA ATGAGCTAAC TAAACTGTTA AGTAAGTCAG CTGTTAATGA AGTCATTGAG
TTTCTTAGAG ACAACCCCGA TATTCAAACG TGGGTATCAA GTGGTATGTC GGTACATGAT
GAGCACAAAT CGGAAAAATG TCATTTCTGC GGAAATAAGA TAGATGAATC AAGGCTCACT
AGTTTAAACA ATCATTTTAG TAATGAATTC AAAATATTGA AGCAAGAGAT TACTGAGGCA
ACAAAGTACT GTCCTGATTT GCCTGAGCTT ACTTTACCCA GCGTTGAGTC ATTTTTTGAT
GAGTTTCAGA CTGAGTATAA AGATGCAGTA GCTCCTTTGG TGGGAGTTGT AACTGAAATC
AAGAGTATCG TAGATAAGTG GCAAGTATGT ATAGAAAATA AATCAAATGA TCCATTTGAT
ATCTCTCAAA AGATTTCGTC TGTAACAGTG GATTTGATAG ACCAATATAA CAAAGTGATT
CTTGATATCG CTACTTGTGT GAAAAAACAC AATGACAAAT CAGAAAACTT TCAGTCCGTT
ACGACCTCAC ATAAAAAAGC ACTTGAACTT CATTACGCCG CAGATGAAGT TATCGATTTT
GAATACAGCA AAAAAATAGA AGATAGAAAG ACCGCATATG CTAATGTACA AAAGCTGAGT
GATGATATTT CTGCAATTAT GAAAGAAATA CAGAGACTTG AAGCAGAGTT ATCGAATGAG
TCAATTGCCG TAGATGCTTT CAATGCTGAG CTGGCAAAGT TTATTGGGAG AACTGAGTTA
ACTTTAAGGT TTGATGCAAA GCAAAAAGGC TATCGGATTT CACGTAATGG GTCCGATAGT
CACGCTCAAA ACCTGAGTGA AGGTGAGAAA ACTGCGATCG CATTTGTCTA CTTCGTGACG
AAACTAGAAG AACGCGATAA TGATATTAAG AATACGATTG TGGTGATTGA TGACCCAGTT
TCTAGCTTTG ACTCAAATCA TTTGTTTCAC TCGTACTCAT TCTTGAAAAA GCACTGTGAA
CAGGCAAAGC AGTTGTTTGT AATGACGCAC AATTTTGCCT ACTTCAAGTT GGTAAGAGAC
TGGATACTGA AGAAAAATCA GATGCGTAAA CAACCGCCAG AGATCAAAGC AAGAGCTTAT
ACAATTGAAA GTAAATCTGA TGGGGTGCGT CAGTCTAAAT TGGTTAACGC AGGCCATTCA
TTAACTGATT ACAATTCCGA GTATCACTAC CTGTTCTCTA AACTTTATTC TCTAAAAGAG
AAACACGAGC TTAATCTTGA TGAAGTGTAT TTGTGTGCAA ATTTGTCGAG AAAGCTTCTT
GAATCTTTCT TGTGCTTTAA ATTTCCTAAA AAGAGAAATG ATTTTAGGCA GCTAGTTGAT
GATGGCGTAA AAAAATATCC TGAAATCAAA CCTGAAGATG CTGAAAAGGT TTATCGCTTT
ATCAACAAAT ACTCGCACAA CCAAGAGATT GAGTTAGAGG ATAATGTTGA TAACTTGCTT
GGAGAGTCAC CTGCGATTCT CAATATCCTA TTAGATATGG TAAAGACAAT TGATGAAGTA
CACTTTACTG AGATGGAAGC AATTGTTACT ACTTAA
|
|---|
| Protein sequence | MINGISKIKT LRSFGIYENH INDGCDEFAK FNLIYGWNGS GKSTLSRLFR CIENKKLDGT
NYTESAFEIE YSLDGQAQSI LTQQNLSQNQ LNIRTFNNDF VRENIDWSGT VKSILLVDQR
KIEERKLLDE QNKTLKLKES ASEKEAKIAD DLDTEINKFL TRTAKNIKTS LKLIGTEDSK
YLNYNKTSLE NLIRTSSAEI VDPASVLTDE QITLHTKSAS PVEKDKISFA ANTISQHYFE
SSFNELTKLL SKSAVNEVIE FLRDNPDIQT WVSSGMSVHD EHKSEKCHFC GNKIDESRLT
SLNNHFSNEF KILKQEITEA TKYCPDLPEL TLPSVESFFD EFQTEYKDAV APLVGVVTEI
KSIVDKWQVC IENKSNDPFD ISQKISSVTV DLIDQYNKVI LDIATCVKKH NDKSENFQSV
TTSHKKALEL HYAADEVIDF EYSKKIEDRK TAYANVQKLS DDISAIMKEI QRLEAELSNE
SIAVDAFNAE LAKFIGRTEL TLRFDAKQKG YRISRNGSDS HAQNLSEGEK TAIAFVYFVT
KLEERDNDIK NTIVVIDDPV SSFDSNHLFH SYSFLKKHCE QAKQLFVMTH NFAYFKLVRD
WILKKNQMRK QPPEIKARAY TIESKSDGVR QSKLVNAGHS LTDYNSEYHY LFSKLYSLKE
KHELNLDEVY LCANLSRKLL ESFLCFKFPK KRNDFRQLVD DGVKKYPEIK PEDAEKVYRF
INKYSHNQEI ELEDNVDNLL GESPAILNIL LDMVKTIDEV HFTEMEAIVT T
|
|---|
| |