| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0423 |
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| Symbol | |
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| ID | 4251897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 469613 |
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| End bp | 471286 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638116982 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_732560 |
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| Protein GI | 113968767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.955955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG TACAACGCAG TTTCTATTTT ATTTTTGCAC TTTTGTTTGC GGCTGGCATG
CATTATTACC AATATAACTA CGGTGGCGTA GGCCTCACAG CACCTTTCAA CTTAATGACG
TGGGGCTTTG TATCGATACT AATCGGCTTG GGTCTGTGGC ATTGCAGCCA AAATGGTGAG
ATTTACTACT CCCCCTTATT AGTTGCCACA AGTCTTTTTG TCGCGTCATT ATTTATACCT
ATTCTCTATA GCAACAATGA GCTACTCATC CATAGTACAC AACGGCTGAT TGGTTTAACT
GCAGGTCTTG CATTTCTTTT CAGCTTGTAT CAAATCAACT TACCCGTTGA AAAATGGCAT
AAACTTATCC CATGGATACA GGTTGGTATA ATCATTGAAG GAGGGATTTG TTTCACCCAA
CAGTATGTGT TTCCTGACAC AGTATGGATG CAACATAATC CCAACTTGAG ACCATCAGGC
ATTTTTCAGC AACCCAATGT CATATCGACG TTTGCCGTAA TGGGTATTGC ACTGGCTACC
TTCAACTTAG CCTTCAATAA ACATACCTCA AAGATTGAGC AATACATCAT TAATCTTGCA
GGACTGGTTG CGGCCTGGAT CATCATGCTT AACACCTCAA GAACCGCAAC TATCGCCTTG
TTTATCGTTT TAATAGGGAC GGCACCATTA TTATACCGTC AAGCAAATAG AGCACACCTA
CGACACTGGT ATTATGCCAT TCTCCTCGGG CTAGCAATAC CGCTAATACT CAACCTAATG
GACTCAACAT TTAAGCCCCG TGAAATCGTC GAAAACATCA GACCTACCTT ATATTTTATT
TCTTTAGGTT TAATAGCAAA AAATCTACTC ACAGGGGTAG GTTATGGCGG CTTTAGCGTT
AATTTTCATC AAGCCCAAGC CGAATACATT GAAACCCACG AGTTTAGTAA AGAACAGTTC
GCGAATAATG CAGCCCATCC ACATAATGAA GTTTTACTCT GGGGAGTCGA AGGAGGCCTA
TTGCCCCTTA TCTCTTTTGT AATTTTATTT ATTTTCGTTG GTTACCGATA CTTAGCCTTG
GGATGGCGTA AGGGGATTTT TTACTTATCA ATTATCTTCC CCGCGGCTTT TCACTCTATG
ACAGAGCTGC CCTTTTACCA TGCTGCAATT GTGTTTATTA CATTCACTTT TACAGCTTAC
ATGATTGAAA AATCAGCTTT TATAGAAAAA AAAACCACAC TACCCCAAGC CCTAAACTTC
AAACTTACGG CATTGATCAT CCCCGCTCTA ACCCTGTGCT TTACGTTAAC AGGATTGCAC
ACCCTTAATC GCCTGCGTCA TTTTCAGCAA ACAGGCCATA GTGATATGAC CTACCTGCAA
GAGATCATAA ATCCAATAGC AATATCAGAA ACTATTGACT ATGCTTGGCT TACGTCGCCT
TTATTAACAA ATCGACAAAA TACTGAATCA ATAGAACGTT TTATTGCAGC CACAGAGCAA
AAATTGAATT ACTGGCCAAG AGCTAGACTC TATCAAGATC TTGCTACTGC CTATCAATTG
CAGGGGAATC AAGAGCGAGC AAACAGTGTC TACAGAGAAG GCAAACGACT TTTCCCCTTC
AATCAAAAAT TCAATAGTAT AGAGGACAAC CTTATTGAGC TTTCTACACC ATAA
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| Protein sequence | MTTVQRSFYF IFALLFAAGM HYYQYNYGGV GLTAPFNLMT WGFVSILIGL GLWHCSQNGE
IYYSPLLVAT SLFVASLFIP ILYSNNELLI HSTQRLIGLT AGLAFLFSLY QINLPVEKWH
KLIPWIQVGI IIEGGICFTQ QYVFPDTVWM QHNPNLRPSG IFQQPNVIST FAVMGIALAT
FNLAFNKHTS KIEQYIINLA GLVAAWIIML NTSRTATIAL FIVLIGTAPL LYRQANRAHL
RHWYYAILLG LAIPLILNLM DSTFKPREIV ENIRPTLYFI SLGLIAKNLL TGVGYGGFSV
NFHQAQAEYI ETHEFSKEQF ANNAAHPHNE VLLWGVEGGL LPLISFVILF IFVGYRYLAL
GWRKGIFYLS IIFPAAFHSM TELPFYHAAI VFITFTFTAY MIEKSAFIEK KTTLPQALNF
KLTALIIPAL TLCFTLTGLH TLNRLRHFQQ TGHSDMTYLQ EIINPIAISE TIDYAWLTSP
LLTNRQNTES IERFIAATEQ KLNYWPRARL YQDLATAYQL QGNQERANSV YREGKRLFPF
NQKFNSIEDN LIELSTP
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