Gene Shewmr4_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0390 
Symbol 
ID4251723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp438358 
End bp438687 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content46% 
IMG OID638116949 
Productfrataxin family protein 
Protein accessionYP_732527 
Protein GI113968734 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1965] Protein implicated in iron transport, frataxin homolog 
TIGRFAM ID[TIGR03421] iron donor protein CyaY 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA CAGATACAGA ATTTCACCAG CTCGCCGATG ACATGTTCCA AGCGATAGAG 
ACCGCTATCG AAACCGCAAT TGATGAACAA GACGCCGATG TCGATATTGA TGCCAGCGGT
AACGTGTTAC AGCTGGAATT TGTCGATGGT TCGAAAATTG TTATCAACAA ACAAGAGCCT
TTGCATGAGA TTTGGGTTGC AACCCGTTTC GGTGGCTATC ACTTTGGTTT TGTTGATGGT
AAATGGATTG ATGGCCGTAA TGGTGGCGAG TTTATGCCCT TTGTACAGGA CTCAATCCTT
CGCCAGAGCG GTATCGCACT GAGCTTCTAA
 
Protein sequence
MAMTDTEFHQ LADDMFQAIE TAIETAIDEQ DADVDIDASG NVLQLEFVDG SKIVINKQEP 
LHEIWVATRF GGYHFGFVDG KWIDGRNGGE FMPFVQDSIL RQSGIALSF