| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0355 |
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| Symbol | |
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| ID | 4251549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 378221 |
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| End bp | 379246 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638116910 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_732492 |
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| Protein GI | 113968699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTCTAT GGTATTTGAG TTGTTTATTT ATAGGTTTGC TGTGTTCCAC GTCGCCTGCA
TGGGCCAAAT TAGAGGTGGC CTTTTTTAAC CCAGGTGCTG CAACGGATAG CTTTTGGGGC
GATGTCGATA AATTAATGGA AGTGGCTGCA ACTCGGCTCG ATATTAATTT GCAAATTATT
CATTCTGACC GTAATCATTT TAAAATGATT AGTCAGTTAG ATGAATTATT AAAATCTGGT
CGTTCGATTC CAACGCATAT TGTTTTAGTG AATGAGAAGC AGTCAGCAAT AAAAATGTTG
CAGATGCTTT ATGGCTATCC CATATATGTG CAGTTGATAC TGAATGATAT TTCACTGGCT
GAGCGGGAAA CCTTATTAGC GGATCCGCAT TGGCAAACCT ATTTATTACC CGCCATTATT
CCCGATAACT ATGCGATTGG TGCTGAGACG GCTAAGACTC TATTAAGTGG TTTACAGGAT
AAAAAAGCTA AGGTTTTATT AATTTCGGGC GATAAGTCTA CGCCCGCCTC TGTGCTACGC
ACTCAAGGGG CGAACGATTA CTTTTTTATG CAACCGAATG TCACTGTGAC CCAAACCGTC
TATGGGCAGT GGCGCGAGGA CATCGCCTAT GGGCAGGCTT TAACACTGCT CTCACGCTAT
CCAGATTTAA ATCTAATTTG GACGGCAAGC GATAATATGG CTATGGGAGT GGTAAAGGCG
CTGCGTGAAA AGGGACTACA GCCTGGTCGT GATGTGTTAG TGAGTTCAAT GAATACTTCC
GCACAGATCT TAGATCTTCG CCAATCAGAA TTTGTCACCA CCTTGGGGGG CGGGCATTTT
TTAACGGGCG CCCTAGGATT AGTGCAGTTA AAACATTATC AAACGACTCA TCAATATTAT
CCCTATGCGG ATATACAACT TTTTAGTGTA CTCAACCCAA ATTCTGATTT TTATCGAATG
TTAGTCGCTC GGGATTGGGC GGGGATTTTT CAGACGCAGA TTTTGAATAA GTTGCCACAA
CAATAA
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| Protein sequence | MRLWYLSCLF IGLLCSTSPA WAKLEVAFFN PGAATDSFWG DVDKLMEVAA TRLDINLQII
HSDRNHFKMI SQLDELLKSG RSIPTHIVLV NEKQSAIKML QMLYGYPIYV QLILNDISLA
ERETLLADPH WQTYLLPAII PDNYAIGAET AKTLLSGLQD KKAKVLLISG DKSTPASVLR
TQGANDYFFM QPNVTVTQTV YGQWREDIAY GQALTLLSRY PDLNLIWTAS DNMAMGVVKA
LREKGLQPGR DVLVSSMNTS AQILDLRQSE FVTTLGGGHF LTGALGLVQL KHYQTTHQYY
PYADIQLFSV LNPNSDFYRM LVARDWAGIF QTQILNKLPQ Q
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