Gene Shewmr4_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0342 
Symbol 
ID4250853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp365342 
End bp366160 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content52% 
IMG OID638116897 
Producthypothetical protein 
Protein accessionYP_732479 
Protein GI113968686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCT TCCTCGCACG TTCTAAGTGG TGGCTAGGGT TCTGCCAAAG CCTGCTAATA 
ATCTGCACAC TGCTGTTTGG CTCGGTACAG GCACAGAGCC TCACCGATTC GAACCTCACA
AGTTCGAGCC AATATCAAAC GCTATTTGCC CAAGGCGCAG ATAAGGCTGC ATTGCTCGCC
CTTAGCCAAA AGCTCAATCT TGGCGAGACG GTTCGCGGCC ACTTTGTGCA ATCGCGCCAG
CTTAAAGTGC TGAAAAAGCC CCTCGTGAGC CAAGGTCAGT TTGTGTTCGA CAAGGCACAA
GGGCTTATCT GGCAACAACT TAGCCCCTTT GAGTCCTTGC TGATTTTAAA AGATAAGCAA
CTGATCCAAA AAGATAGCCA AGGGCGAGTG CAAATCAGCC AAGCCGATGC TTCGGCAAGC
GCGGCGGCCA TGGGAGATTT GCTACCGAAC CTAGTGAATG CCATGCTGGG CGGCGATATT
TCGGGCTTAA GTGCAAACTT CGAATTGCAC TTTTTAGCCC AAGAACCCTT AGCGCAAGAC
AAGTCGCCAC AAGAAAGCTC AAGTTCAAGC AGCGCAAACT GGCAGTTGGG ATTAACCCCA
AAAGATCCGC TGATGAAGAA GGCCATCGCC CACATGGTGC TCGAAGGCAG TGATACTTTA
CACGCCTTAG TGCTACTCAG CGCCAAGCCG AGTGTGAGTC CGCAGGATAT TACCCGTATC
GATTTTAGCG AGCTGCGCCA AGGTCCACTG AGTGAGGCTG AGTTAGCCCA ATATGCCATC
AGCCAGACGA GTTCTAAAGA CGCGGGTTCA AAGGAGTAA
 
Protein sequence
MIAFLARSKW WLGFCQSLLI ICTLLFGSVQ AQSLTDSNLT SSSQYQTLFA QGADKAALLA 
LSQKLNLGET VRGHFVQSRQ LKVLKKPLVS QGQFVFDKAQ GLIWQQLSPF ESLLILKDKQ
LIQKDSQGRV QISQADASAS AAAMGDLLPN LVNAMLGGDI SGLSANFELH FLAQEPLAQD
KSPQESSSSS SANWQLGLTP KDPLMKKAIA HMVLEGSDTL HALVLLSAKP SVSPQDITRI
DFSELRQGPL SEAELAQYAI SQTSSKDAGS KE