Gene Shewmr4_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0312 
Symbol 
ID4251926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp338620 
End bp339867 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content53% 
IMG OID638116867 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_732449 
Protein GI113968656 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATACG TGTATTCTAT TTGCAGTATT AACATGACTT TTATTGAATC TCTTACCCTG 
ATGCTGGCCC TGATGTATAT CGCATCCCTA AGCTATTGGA GCGGTAAAAA ATGGGGAGCA
GTGGCCACCT TACTCCTGAG TGTTGGCGCC GTGGCGATTA GTCTCTACTG GCCTTTGGCA
CTCGCTCTAG CCATTGCCTT GCCGTTGTGC CTGATTGCCA ACAAGTTTGC CCCTGAGGAA
TTAAAGGGCG AGATAAAAAT CAACATCCTG CGTGAAGGCT GCCAACATCT GCTCGCGCTC
TCATTGTTTA TCGTCGCTAT ACAATACTGC ATCAATGCTA TCCAGCTTAA ACAAGGTATA
GTGCCTTGGT TGATGCGCCC CGATGTCGTC GATGCCTTCT TACCTATCGC GGGTGGCATT
GAGCTAAAAG CCATAGTGAC GCTCAACCTA CGGGACCAAA CCCATCCCGC CGCAGCCGTC
ATGCTCGCCG CCGTGCTACT CACGGGCCTA CTCTGCAAAC GCGCCTTTTG TGGCTGGGCC
TGTCCATTAG GGCTTGCTGG CGAATATCTC TACGCCTTAC GCAAGCGCTT TATCAAAGCC
GAACTGGCGC CGCCCGCATG GTTAGACTGG CCACTGCGGA TGCTGAAATA CTTATTGCTG
CTGGGGCTGT TTTACATCGT TATCGGTATG CCTAGTGAAT CGATTCCCTA TTATCTGCAG
GGCAACTACC ACAAGATTGC CGACCTTAAG ATGGCGCTGT TTTTTGTCAC GCCCGGCCTC
ATCACCTTAG CCTGCTTTGC GCTTATCCTC GCCTTAGCGG CATGGCGTCG CCAAGGATTT
TGCCGCTACT TGTGTCCCTA TGGTGCCATG CTTGGGATCT TAAGTTTTGC CAGCCCACTC
AAGATCCGCC GCAATACTCA ACATTGCCTG ATCGAAGCCA AGGGCATGAA GTGCGACAAA
TGTACCCGCG CCTGCCCAGC CAACATCATA GTGCACACCA AAACCACGGT ACGCAGCGAC
GAGTGCCAAG CCTGTATGCG CTGCGTCGCC GCCTGTCCTA AATCGGCGGC GCTCGGTTTT
AGCCTAAAAT CTGGCCACAG CGTTAGCCAT AAGGGCTTGT TAGTCTTGTT ATTATTGGCA
CTCTTTGCCC TGCCACTCGG CGCCTATTTA GCCGGGTTCT GGCACAGCCA AACACCGGAC
AGTATCCGCA TGGAGCTTAT CCAAGTGATT GACCGAGTGG GCCATTAA
 
Protein sequence
MGYVYSICSI NMTFIESLTL MLALMYIASL SYWSGKKWGA VATLLLSVGA VAISLYWPLA 
LALAIALPLC LIANKFAPEE LKGEIKINIL REGCQHLLAL SLFIVAIQYC INAIQLKQGI
VPWLMRPDVV DAFLPIAGGI ELKAIVTLNL RDQTHPAAAV MLAAVLLTGL LCKRAFCGWA
CPLGLAGEYL YALRKRFIKA ELAPPAWLDW PLRMLKYLLL LGLFYIVIGM PSESIPYYLQ
GNYHKIADLK MALFFVTPGL ITLACFALIL ALAAWRRQGF CRYLCPYGAM LGILSFASPL
KIRRNTQHCL IEAKGMKCDK CTRACPANII VHTKTTVRSD ECQACMRCVA ACPKSAALGF
SLKSGHSVSH KGLLVLLLLA LFALPLGAYL AGFWHSQTPD SIRMELIQVI DRVGH