Gene Shewmr4_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0127 
Symbol 
ID4250620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp142901 
End bp143311 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content48% 
IMG OID638116670 
Productflagellar basal body-associated protein FliL-like protein 
Protein accessionYP_732265 
Protein GI113968472 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000178302 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT TATTATCAGC CTGCCTGATC TTATTCAGTG TTGTATTGAG TGCATATGCG 
GCCGACGAGA AAGAAGCTGC TCCCGCTGGA GATTACGCTT ACTACGGTTT TGAACCCGAA
ATCGTGACTA ACTATATTTC AAACCGCAAG AAGCTGGGGT TTGTGAAGAT CAGTGTCGAG
CTGATGGTGA AAAATCCCGA TGATCTCGTC ATCCTCGAGC GCCATGACCC GCTGCTGCGC
GCCGCGATTA TCGAAGTGCT GGGTAATCAG GCCGAAGAAA AGATTAAGTC CCTCACTGGC
CGCGAAGAAA TCCGCCGTGA GTGTTTCGAT ATGGTGAATA ATCTGCTGAC CAAAGAAGCG
GGCAAACCTC TCGTGGTCAA CCTGCTGTTT ACCTCCTATC TTTACGATTA A
 
Protein sequence
MKKLLSACLI LFSVVLSAYA ADEKEAAPAG DYAYYGFEPE IVTNYISNRK KLGFVKISVE 
LMVKNPDDLV ILERHDPLLR AAIIEVLGNQ AEEKIKSLTG REEIRRECFD MVNNLLTKEA
GKPLVVNLLF TSYLYD