| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0017 |
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| Symbol | fadA |
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| ID | 4250616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 19987 |
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| End bp | 21150 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116556 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_732156 |
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| Protein GI | 113968363 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000928533 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAG CTGTTATCGT AGATTGCATT CGTACTCCTA TGGGCCGTTC TAAGGCTGGG
GTGTTCCGTA ATGTACGTGC AGAAACACTC TCTGCCGAAT TAATGAAAGG TCTATTACTG
CGTAACCCGC AATTAGATCC CAATACTATT GAAGACGTGA TTTGGGGCTG CGTGCAGCAA
ACCCTAGAGC AAGGCTTCAA CATTGCCCGT AACGCATCAT TGCTGGCAGG TATCCCGAAG
ACGGCTGGCG CCGTGACAGT CAACCGCCTA TGCGGTTCTT CAATGGAAGC CATCCATCAA
GCCGCTCGCG CAATCATGAC TGGCATGGGC GACACCTTTA TCATTGGTGG TGTTGAACAC
ATGGGCCACG TGCCAATGAA CCACGGTGTG GACTTCCACC CAGGTTTAGC CAATAACGTC
GCTAAAGCGT CAGGCATGAT GGGCTTAACC GCTGAGATGT TAGGTAAGCT GCACGGTATT
ACCCGTGAGC AGCAAGATGC CTTTGCAGTG CGTTCACACC AACGCGCTCA CGCAGCGACT
GTTGAAGGCC GCTTTGCCAA GGAAATCTAT GGCATCGAAG GCCATGATGC TAACGGCGCG
CTGATTAAAG TGCTGCACGA CGAAGTGATT CGTCCAGAAA CCTCAATGGA ATCATTAGCG
GCGCTGCGTC CAGTATTCGA CCCTGCAAAC GGTACAGTGA CTGCCGGTAC CTCTTCAGCA
TTATCTGACG GCGCTTCGGC GATGTTAGTC ATGGAAGAGT CTAAAGCGCG CGCTTTAGGT
CTACCAATCC GTGCCCGTAT CCGCTCAATG GCCGTTGCAG GTTGTGACGC GGCAATCATG
GGTTACGGTC CAGTACCTGC TACTCAAAAA GCACTGGCTC GCGCAGGCAT CACAGTCAAT
GATTTAGATG TTATCGAACT GAACGAAGCC TTTGCCGCGC AATCTTTACC CTGCGTGAAA
GATTTAGGCC TGTTGGATGT GGTCGATGAG AAGATTAACC TCAACGGTGG TGCTATCGCG
CTTGGCCATC CACTGGGTTG CTCTGGTGCG CGTATTTCAA CGACGCTGAT CAACCTGATG
GAACACAAAG ATGCGACCTT AGGTTTAGCG ACTATGTGTA TCGGTTTAGG CCAAGGTATT
GCGACCGTTT TCGAACGCGT TTAA
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| Protein sequence | MKQAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKGLLL RNPQLDPNTI EDVIWGCVQQ
TLEQGFNIAR NASLLAGIPK TAGAVTVNRL CGSSMEAIHQ AARAIMTGMG DTFIIGGVEH
MGHVPMNHGV DFHPGLANNV AKASGMMGLT AEMLGKLHGI TREQQDAFAV RSHQRAHAAT
VEGRFAKEIY GIEGHDANGA LIKVLHDEVI RPETSMESLA ALRPVFDPAN GTVTAGTSSA
LSDGASAMLV MEESKARALG LPIRARIRSM AVAGCDAAIM GYGPVPATQK ALARAGITVN
DLDVIELNEA FAAQSLPCVK DLGLLDVVDE KINLNGGAIA LGHPLGCSGA RISTTLINLM
EHKDATLGLA TMCIGLGQGI ATVFERV
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