Gene Shewana3_4377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4377 
Symbol 
ID4476005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp264486 
End bp265601 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content49% 
IMG OID639720732 
Productphage integrase family protein 
Protein accessionYP_863890 
Protein GI117676314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.53808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTTAT TAACTACGAA TAATCACAGC GTTGCACTGT CCTATGGCGA ACCTCCGTCA 
ACGCTTAACG ATTCGTTAAA AGACAGTTAT CAGCGCTCTA CTGACGAGCT ACAGGCGCTA
TTGTCAAAGC CTCTGGCTCA GTTAACCGAT GCAGACAAGC TCCGCATTCG GGAGATTACA
CAGGCAAAAC TCAAGCACTT TCTTGATAAT GGCCACCGTA CCCGCAGGGC TAATACATGG
CGAGCACTAA TGAGCCGGTG GGCTAAGTTT GAAAGTTGGT GTCTTACAAA TAACCTAACC
CCGTTGCCTG CGACCCCCGA GGTAGTGGCC ACATTCATTG AGTACTACCA GGCATCGTCG
TACACCACCT TATCTCAATA TGCTTGGGCG ATTAACAGTT TCCATGTGGA GTGTGGTTTG
TTGTCCCCTG TGAGCAGTAA GACCGTGCAA GACAAGCAGA ATGAAATCAG AATAGTAAAG
CTCGAGTCAG GCGGTTTAGC GCAAGAGCAG GCAACGCCTT TTAGACTTCA TCACCTGCAG
ATGCTCATAG AATCGTATGG CGAGAGTGAG AGGTTATTAG ACAAGCGCAA TTTGGCGTTG
CTGAACATCG CCTATGAATC GTTGCTTCGT GAATCCGAGC TGCTTCGGAT CAAAGTAGGC
CATCTCAAAT CCACTTTTGA AGGCGATTAT GTGTTGTCAG TGCCTTACAC CAAAACCAAT
GACTCGGGTG AAGAAGAGGT AGTGAACATT ACACCGCTAG GCTTCAAATT GATTCAGAGG
TACATCCAAG GTGCTGGGCT GACTAAGGAA GACTACTTGT TTCAGCCGAT TGGCCGGAGC
AATAAAGTCT CGGTTCAAGC CAAGCCGATG TCCACCCGTA CAGTGGACCG AGTATTTCTG
TGGGCATTCG AGAGTTTAGG AATCGACCGT CATTCTGCTT GGTCAGGGCA TAGTGCCAGG
ATTGGCGCCG CACAGGACTT ACTTGCCGCA GGCTATTCGA TAGCCCAAAT CCAAGAGAAC
GGTCGTTGGA AAAGCCCAAT GATGGTATTG CGGTACGGCA AAGACATTAA GGCAAAGGAA
AGTGCGATGG CCAAGATGTT GGCAGAAAGA CGGTAG
 
Protein sequence
MSLLTTNNHS VALSYGEPPS TLNDSLKDSY QRSTDELQAL LSKPLAQLTD ADKLRIREIT 
QAKLKHFLDN GHRTRRANTW RALMSRWAKF ESWCLTNNLT PLPATPEVVA TFIEYYQASS
YTTLSQYAWA INSFHVECGL LSPVSSKTVQ DKQNEIRIVK LESGGLAQEQ ATPFRLHHLQ
MLIESYGESE RLLDKRNLAL LNIAYESLLR ESELLRIKVG HLKSTFEGDY VLSVPYTKTN
DSGEEEVVNI TPLGFKLIQR YIQGAGLTKE DYLFQPIGRS NKVSVQAKPM STRTVDRVFL
WAFESLGIDR HSAWSGHSAR IGAAQDLLAA GYSIAQIQEN GRWKSPMMVL RYGKDIKAKE
SAMAKMLAER R