| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4372 |
|---|
| Symbol | |
|---|
| ID | 4476032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | + |
|---|
| Start bp | 260617 |
|---|
| End bp | 262353 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639720727 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_863885 |
|---|
| Protein GI | 117676309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.479837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.588652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCATT CTGTCATGTT AGCCGACCAA GGCGAGTTTA ACTTTTCAAC CGCTCAACGT
GTTAGGCACT TGAAGGCAGA GGACCAGGAT TTTGAATGGT ATCCGTCTTC TCAGCACATT
ATTGATGTTG TTCGAAATGA TTTGGTTAAG TCTAATTTCT TAGAATCTTA TAACAGGGAG
TCATCGTTGC TAGACATTGG TGCCGGTGAT GGTCGAGTGC TTAGCGCCCT GAACATGCCG
TTAGAGGACC GTCGCGGCGA AATGAGCCCA CCTTTTTACA ACCTGTACGC GATTGAAAAG
AGCATTGTTC ATTGCAGCCA GCTCGATAAA AAAGTGTTGG TTATTGGCAC TGACTTTAAT
CAGCAAACCC TTGTTGATAA GCCCGTTGGC GTCATTTTCT GCAACCCTCC TTATTCGGCC
TTTGAGCAAT GGGCTACCCG TGTCATTTCC GAAGCTAATG CCGAAGTGTG TTATCTGGTA
TTGCCGAAGC GCTGGTCTAA CAGTCAAGAT ATCGAAAATG CGATTACAAT GCGTGAAGCC
GAAGCCGAGG TCATTGGGAC ATTCGATTTT CAAAATGATT GTGATCGCGA AACTCGTCAT
TCGGTACGGG TAGACATTAT TCGTGTTAAT TTAGGTTATA AAAATCATCG CCAATGCAAG
GTTGACCCTT TCAAAGCGTT CTTTGACGCC AACTTTGACC TAGAACTAGC TGAAAGTGAT
TATTCTGCAA AATTCAGAGG GCCATCCGAC TCGACTAAGC AAAAGCTAAA TGAATTAGTT
CCTGGTGCCG ACATGGTAAA GGCTATGCAA TCACTTTACG ATCATCAGAT GGCCAAGCTA
ATGGATACCT ATAGCGCACT CTCAGAAATT GATCCTGATT TACTGCGAGA ACTAGAAGTT
TCTAAGGCGT CGGTGCTGGA AAGTCTCAAA CTCAAAATCA AGAGTCTCAA AAGTTTGTTT
TGGAAAGAGT TGTTCGCTAA ATTTGATGCG CTGACTTCTC GCCTGACTTC ATCTAATCGT
AAGGGGTTAT TAGAGCTGTT AGAGAGGCAC GTAAGCGTCG ACTTCACCGC TGAGAACGCA
TACGCGATAG CTCAATGGGC AATAAAACAC GCTGATGCTC TTCAAGATGA TCAGTTCAAA
GATTTCTACC TATCTATGAG CCAAGCCGCA AACGTGGTTA ATTATTCCAG TAACCAACGC
ACCTTCAAAT ACGACAGATG GCGTTATCGG GAGCTTGTGA TGAATGGTCA AATCTCTCAT
TTTAAACTCG ACTACCGTTG TGTAATGGAA AATGTTGGCG GCATCGTTAA TGGTTACGAC
TATAACAGCT ATTACAACCA GTGCGGTTTG TCTGTTCGTG CAATCGAATT TATCACCGAT
TTTGTCACCA TCGCTGGCAA TCTTGGTTTC GATACACGCG GCACACCTAA ACCTTATGAG
TTCAAATGGG CCAGCAACAA AGCCCACGAC TTTAGATACA TACAATCTAA CGGCTCTAGC
GAGGTACTGT TCTCAGTTCG TGCGTACCTT AACGGTAACC TACATATTAA GATGAACCCT
AAGTTGGCGC TAAAGTTAAA TGTAGTGGCT GGTAAGTTGT TTGGCTGGGT TCGTAGCGCA
GAAGAAGCGG CGGCTGAAAT GGAGGCTCCA GCATCTCAGG TCGTGGAAGT TACTGAAATG
TTCGGCCATT CGTTATCGTT AACGCATAAC TATCAAAACC TTTTGATGGC GGCTTAA
|
|---|
| Protein sequence | MSHSVMLADQ GEFNFSTAQR VRHLKAEDQD FEWYPSSQHI IDVVRNDLVK SNFLESYNRE
SSLLDIGAGD GRVLSALNMP LEDRRGEMSP PFYNLYAIEK SIVHCSQLDK KVLVIGTDFN
QQTLVDKPVG VIFCNPPYSA FEQWATRVIS EANAEVCYLV LPKRWSNSQD IENAITMREA
EAEVIGTFDF QNDCDRETRH SVRVDIIRVN LGYKNHRQCK VDPFKAFFDA NFDLELAESD
YSAKFRGPSD STKQKLNELV PGADMVKAMQ SLYDHQMAKL MDTYSALSEI DPDLLRELEV
SKASVLESLK LKIKSLKSLF WKELFAKFDA LTSRLTSSNR KGLLELLERH VSVDFTAENA
YAIAQWAIKH ADALQDDQFK DFYLSMSQAA NVVNYSSNQR TFKYDRWRYR ELVMNGQISH
FKLDYRCVME NVGGIVNGYD YNSYYNQCGL SVRAIEFITD FVTIAGNLGF DTRGTPKPYE
FKWASNKAHD FRYIQSNGSS EVLFSVRAYL NGNLHIKMNP KLALKLNVVA GKLFGWVRSA
EEAAAEMEAP ASQVVEVTEM FGHSLSLTHN YQNLLMAA
|
|---|
| |