Gene Shewana3_4361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4361 
Symbol 
ID4476021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp246302 
End bp247450 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content44% 
IMG OID639720716 
Producthypothetical protein 
Protein accessionYP_863874 
Protein GI117676298 
COG category 
COG ID 
TIGRFAM ID[TIGR03187] DGQHR domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAA CAGAACATCA ATCAACACTT TTGCCACTGA CACTTTTCAA GGCTAAAGAA 
GGCCTAAGCA ATAAAGCCGG AGTCACGATA TACGAAGGCG TGATTACTTT CGAAGAGCTC
GCCAAGCACT TTCCCGTAGA GGCCAACAGT GACGTTTTAA GCGAGCAACT GAAACGCCAG
CGGGATGTGG ACTCAGGTCG TGTTAACGCC CTAAAGCGGT ACTGGCAGGA AACCGACGCG
GCAGTATTCC CGAATATGAC TTTCTTCTGT AATGAGTTGA CCGTCTTAGA AGAAATGAAG
ATAGGTAATC GGTCCGTGGT CACTGCGGAA CTTCCTGCAA CGGCTGACAG ATTTATTGCT
GACGGCCAAG GCCGAGCCAC TTTTATTAAA TGGCTGTTAG CCCAATACAA AGATCATTTT
AATGATTTCA CCGTCAGCTT TAAGCTCATT CATATCGCTG ACGAATCTCT TACCACTCCG
TTTGCGACAA AGCTAATACG CCAATTATTC AGTGATTACC ATGTATCACT AAAAAAACCA
AATAAATCAA TTAGTCACCA CTTTAACAGC CGTACACCGT TTGCTGCGTT ATGTCATGAA
TTGCTTGAAA TGGAAATTAG CCAAGGCAAA CGACTCAAAG ACCGAATAGG GCTGCACGGT
AAAATCAATT GTGGAACAAT GTGGAAATTC GACCAATTCA AAGCGATGGT TCTGAAGTTC
ATAGGAGTCT CAGCTTCTAC AGCTGACAAA TCATTAGCTG ACGCAGAGCA CTTTGAAGTC
ACGCTAGGAA TTTGCCGGGA TTTTCTGAAG GAAGCAATCT CCAAATTCCC AGTAAACATG
CTCGATGGCC AAGACTACAA ATCTCAGCAT GAGGCCGCCA TGTTTACGAA AGTAGTGTTC
ACCAATGGCT TAGGTCTACT TGGTAGATCA ATATTTGATG CAATTGTGGT GAACGGCACG
GGGGATGACT CTTTCAGTGT GTTCCAAAAT CTGAATCTAC CCATTGCAGA TAAAGCGGAT
AAATTTTGGA TAAAGCACAG CGTAGTCACT CACGAAGACC ACAAGATAGT TCGCGGTAGC
GATAAACGAA TTGGCGCTCT ACTGTGTCAA CACCTGAAGG TATTTCCTAC GTTGGAGCTA
ATGGCATGA
 
Protein sequence
MATTEHQSTL LPLTLFKAKE GLSNKAGVTI YEGVITFEEL AKHFPVEANS DVLSEQLKRQ 
RDVDSGRVNA LKRYWQETDA AVFPNMTFFC NELTVLEEMK IGNRSVVTAE LPATADRFIA
DGQGRATFIK WLLAQYKDHF NDFTVSFKLI HIADESLTTP FATKLIRQLF SDYHVSLKKP
NKSISHHFNS RTPFAALCHE LLEMEISQGK RLKDRIGLHG KINCGTMWKF DQFKAMVLKF
IGVSASTADK SLADAEHFEV TLGICRDFLK EAISKFPVNM LDGQDYKSQH EAAMFTKVVF
TNGLGLLGRS IFDAIVVNGT GDDSFSVFQN LNLPIADKAD KFWIKHSVVT HEDHKIVRGS
DKRIGALLCQ HLKVFPTLEL MA