Gene Shewana3_4305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4305 
Symbol 
ID4476079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp192443 
End bp193609 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content35% 
IMG OID639720662 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_863820 
Protein GI117676244 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCAT TATTTATTCG CATGAGGTTT ATCCATTGGT TAGGTGCTAT TGTACTTTTC 
ATGAATGCAA CCTTTTTCAC AGATCTAATA TTTTCACAGA TCATTCAGTA CATTATTACA
ATATTTTTGA TTATTCATGA TATTGATGAA AAAGTTTGGG GAGTTGACTC CTTAAAAAAA
GTTACCGAAT ACATGAAACA CTTTGAAAGA AAAGATCTTT CAGTTCCATG TACCATCAAT
AGCTTATATA ACAGTGAAAT GGAAAAAGTT CTTAGTGTTA TCAATACATT TAGAGAAAAT
GTAAAAATTG CACTAATCGA TATTCAGCAA CAGGCCATAG CTTCTGATGA AATATCAGAT
CTTCTAAAAG TTAAAGCGCA AAATATTTCA TCGCGTATCA ATGAGCAAGA TAATCGGGTC
AGTATTCTCA CTTCACAAAT AGAGGCCTTA GATCAAACCT CTCTAGCATT ACAAGCTAAA
GCAGAAAAAA CACGTGAACA AGTAGAAAAT ACGCAAATAG GGCTTGTTCG ATCAAACGAA
TATATGGGGG CTATGGTTAA AGATTTAAGC TCGTTTATTG CAAGTAATGA TGAACTCCAA
GAAAAATTTT ATCAACTTTC TCAACAAACA AAAGCCATTG AGGGAGTGGT ATCCGTTATT
AATAACCTAG CCGATCAAAC CAATCTATTG GCTTTAAATG CTGCCATTGA AGCCGCTAGG
GCTGGAGAGC ATGGACGAGG CTTTGCCGTT GTTGCCGATG AGGTCAGAAA TCTAGCCAAA
TCAACCCAAA GTAGTTTAGA TGAAATTAAT CAAATTATAT CAGGAATATC TAAAGCGGTT
CTTGATGCTG GTCATCATAT GAAATCACAA ACATCTGCAA TTGTTCTACT ATCGGATTAC
ACAACAACGA GCCAGTCAGA ATTAGGCGTT GCATGTAAAA ACATCAGTGA AATTTTAACT
TTGATTGGGC AAGATAGAAC AAATAATAAT TTGGATATCC TCTATGTAAA TAGATTAGTT
GGTGATGTAA GTAAGGAAAT TGAGGTGCTA AAACACCTCT CAAGCTCCAA CTCAAATGAT
TGCATCGAAT TAGAGCAGCA GGGCCATAGC TTAACTCAAG TTACTGAAAA AATTGTTCGC
CAATTAGGGA TGTTTAAAAC TAAATAG
 
Protein sequence
MRSLFIRMRF IHWLGAIVLF MNATFFTDLI FSQIIQYIIT IFLIIHDIDE KVWGVDSLKK 
VTEYMKHFER KDLSVPCTIN SLYNSEMEKV LSVINTFREN VKIALIDIQQ QAIASDEISD
LLKVKAQNIS SRINEQDNRV SILTSQIEAL DQTSLALQAK AEKTREQVEN TQIGLVRSNE
YMGAMVKDLS SFIASNDELQ EKFYQLSQQT KAIEGVVSVI NNLADQTNLL ALNAAIEAAR
AGEHGRGFAV VADEVRNLAK STQSSLDEIN QIISGISKAV LDAGHHMKSQ TSAIVLLSDY
TTTSQSELGV ACKNISEILT LIGQDRTNNN LDILYVNRLV GDVSKEIEVL KHLSSSNSND
CIELEQQGHS LTQVTEKIVR QLGMFKTK