| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4281 |
|---|
| Symbol | |
|---|
| ID | 4475935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | + |
|---|
| Start bp | 164071 |
|---|
| End bp | 166488 |
|---|
| Gene Length | 2418 bp |
|---|
| Protein Length | 805 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639720638 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_863796 |
|---|
| Protein GI | 117676220 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.531942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTA ATAAATCACT ACTTTTAGGG CTGTGTAGCG TCATCTGCTC TGGCATGGCT
AACGCGGCAG TAGAAGGCTT TTCGTATACA GACACCAACG CTACAGTGAA AACCACTGAG
GGCTCGCTCA TTAACCCTCA AACTGATGCG ATGGTTTACC TCTCTGGAGG GCTTGATAAC
AAACTTAAGC TATCAGTCAT CAACACCAGT GGAGTGACGG TGTTCAACAA CACCACAGAT
TTTATTCGAG TTTCTGACAG GTTAAGCTTT TCTGGACGAG AATTTTACGG AAAATCAATA
ACTATCCCCA AATTGATGGA TGGTTTGTAT AGCCTTAAAA TCGAAACGAT TAACAGTTCT
GGTACAACAA TTGATCAGTA TACAAAGGTT GTTGAAGTTG ATACTGAGGG ACCTATCATT
GGAGACTGGT ATGGAAATGG AACAAGCAAT TATGGTGCCG AAACAGGGTC GAATGAGATT
TGGTGGCTAA ATACACAAAA CACCGGCGAA GATTCGAAAA TTTGGATAAC GGATGTAAAA
GGTGCGGTTT CAGGTTCTGT CATTGTACAA AAACTAAATT CCGATTCCAT CGTATTAACA
AGACCCATGG TCATAGACCA AGCAGCATTC AAAGCTGTGA TAAATGCACA AACAGACTTA
TCAAATATAT TACCGTCAAA TAACGCTTCT GATCCATATT CAATGCAGGC TCAGCTATAT
GATGCAGCAG GTAACATCAC TCGTTCAACT GTCAAAACAT TCTATTACGA CAACTATGGT
GGGGCTCCAT CTTCTCCTTT TGCAGTCTTC GACCCGGATG CAAACTTGGC TGAAAGTGTA
TCTAGTTCAT TTGTAGGTTT TGTAGCTTAT ACTCCAGGCA TGACAGTCAA AACCAACCCC
GTTCGATTGT TATATAGAGT ACCAGTAGAT AACGTTCGAG ACGCTGGAGT GAAAGGGGGG
CTTGCTCTCG CGAACTCAGT GGGAGCGACA AATGTTATAA TTAATGGTGA ATACGGTTAT
TTTGATATGA CAGCGCCATT TGGATATAAC AACGCAAACC AAATTAAGTG GGTTGACTTT
GGTCGATGGA TGGCAGGCAC TATCCAATAC AATTTGTCAT TGTCTGAAAC TGCTTCAAAA
TCCCCAGTGT TGACGTCAGC AACATTTTTG TTAAATGACG TTCGAATGTC TATTACGACA
GGGATCATGC ATCATAATTC GATTTTGCCA GCTACAATGA CTGATTTTGA GCTTCGGGTG
CAGCCGCGGG ATTACGTGCA ACGCGCAAGT TTTCGTGGAT ATTCTTGCGA CATTCCAGCA
GGTGAGTCAA TTTGTAGCTT AACGGGTTTA ACATATGAGA TGACCAAAGG TGGATATGGC
TATTTGCACG ATGCTATCGG TGTTGTGTCA GTGGGCCTGC CGATGGGAAC ACTTTACGCG
AATTACAGCT ACGGCGAATC AACCTATAAC GATGCTCAAT ACCCGCAAAT GACCAGTTTT
AAAGTTGATA CGACAACTAA CACTCTTACT GCATTTGTTT ATCTACCGGG TGCAGGCAGT
TGGTTTGAAA GGTTAGTCAT GAAGGCCGCT AGAATTAAAT ATGGTACAAA ATATTTAAAC
CCTATTAGTT CAATTCGCAA CGGTGTTAAT TGGGAATACG TCTTTAACTT AAATTCTCTG
CCGACTGGAA ACCATTCACT AGAATTAGAG ATGGTCGAGA ATCACGGGCC TACCACTGTG
TCCCCGCTTC AAACATTCAA AGTAGAAAAC GCCACACCAA CAATAAGCAT TACCAATTCC
GGTAGTGCAG TATTCAATGA AATTGTCGGG CTAGATGACT TGGTAGTGTC CATTGCAGAT
GAATCAAGCT ACACCATCGA TAGTGTTATT ATCTCCGGCG GTTCAGCTAA CGACACGGTT
TACTTGGCCA CTGTAAGTAA AGGCAATAAC GTGTATTCAT TGCAATATCC AAGGCTTTTC
CCATCACTTA CATCCGGTGA GATTTATACT TTAACGGTGA AAGCTACCGA CGTTTTTGGC
AACCAAGGCG TTAGTAGCAA GAGCTTTACT TATCAGCCGC CTAACATAGT AAATGTAGGC
TCATTAACCA CTCTTGCAGT ATCTAGGGAT TTAGCTAGCT CTGCAGACAA ACCTGTCAGT
GAAGTCGTCA TTAATGATCT GAGAACAGTT GAAAGCCAGC TCGCTTCGGG ACCGCAAGAT
GCTTTATTTA CGTTACGCAC TGACGCAGAA ATAAGTGTTC AGGTACTTGG TCAAGTGGTA
AAGCCAGGTC AAACGGTAAC GTTAAACCCG GTGGCTACTT CGGGAGTCGT TAAATTTTCG
GTGTATCCCG CGGCGAGCGG TCAAAAAGGG AAGGCACAGT TTTTATTTGA AATATTAGAA
GTGAAGAGCA ACATCTGA
|
|---|
| Protein sequence | MQINKSLLLG LCSVICSGMA NAAVEGFSYT DTNATVKTTE GSLINPQTDA MVYLSGGLDN
KLKLSVINTS GVTVFNNTTD FIRVSDRLSF SGREFYGKSI TIPKLMDGLY SLKIETINSS
GTTIDQYTKV VEVDTEGPII GDWYGNGTSN YGAETGSNEI WWLNTQNTGE DSKIWITDVK
GAVSGSVIVQ KLNSDSIVLT RPMVIDQAAF KAVINAQTDL SNILPSNNAS DPYSMQAQLY
DAAGNITRST VKTFYYDNYG GAPSSPFAVF DPDANLAESV SSSFVGFVAY TPGMTVKTNP
VRLLYRVPVD NVRDAGVKGG LALANSVGAT NVIINGEYGY FDMTAPFGYN NANQIKWVDF
GRWMAGTIQY NLSLSETASK SPVLTSATFL LNDVRMSITT GIMHHNSILP ATMTDFELRV
QPRDYVQRAS FRGYSCDIPA GESICSLTGL TYEMTKGGYG YLHDAIGVVS VGLPMGTLYA
NYSYGESTYN DAQYPQMTSF KVDTTTNTLT AFVYLPGAGS WFERLVMKAA RIKYGTKYLN
PISSIRNGVN WEYVFNLNSL PTGNHSLELE MVENHGPTTV SPLQTFKVEN ATPTISITNS
GSAVFNEIVG LDDLVVSIAD ESSYTIDSVI ISGGSANDTV YLATVSKGNN VYSLQYPRLF
PSLTSGEIYT LTVKATDVFG NQGVSSKSFT YQPPNIVNVG SLTTLAVSRD LASSADKPVS
EVVINDLRTV ESQLASGPQD ALFTLRTDAE ISVQVLGQVV KPGQTVTLNP VATSGVVKFS
VYPAASGQKG KAQFLFEILE VKSNI
|
|---|
| |