Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4178 |
Symbol | |
ID | 4475884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 44721 |
End bp | 45335 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639720536 |
Product | hypothetical protein |
Protein accession | YP_863694 |
Protein GI | 117676118 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00705375 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0874836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTGA GCTTGAGCCG GACCCATTTG TTGTTCAATC ATTGTTTAAC CAATAAGGCG CCTAGTATGA CCAGGCTGAG TTCACTCGCA TTACTTATGC TTTCCTTGTC CATTACTAAC GGTTTGGCTG CGGCCGACCT GAAGTATCAC CGTGAAGATT ACCCGCATTG GAGCGATCTG GATGGCAATG GTCTCAATAC GCGCCACGAC TTACTCGCAA CCCAATCCAC GGTTAAACCA AGTTTTAGCC GTGATGGTAA AATCGTGACT CGTGGAAGAT GGGTGTCACC TTGGACGGGG CAAATCTATC TCGATGCCTT TGCGCTCGAT GTGGATCACA CTGTACCGCT TGGCTATGCC CATGCCCGAG GCGCTAAATA TTGGGATCGC TATCAGCGTG AAATGTTCGC AAACGATGTG AGAAATTTGC AGGTAGTCGA AAAGGGTTTG AATAAAGAAA AAGGGGCGGC GGGGATCACA GAGTGGTTAC CGCCCACCAA TCAGTGTCAG TATATCTTGC GATTTCACCG GATCATGAAA ACGTATCATC TAAAATATTT CACTAAAGAA GAACCACGGG CGCTGGCGCT GGTAGCTCAG TGTCAAAGGG GGTAA
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Protein sequence | MILSLSRTHL LFNHCLTNKA PSMTRLSSLA LLMLSLSITN GLAAADLKYH REDYPHWSDL DGNGLNTRHD LLATQSTVKP SFSRDGKIVT RGRWVSPWTG QIYLDAFALD VDHTVPLGYA HARGAKYWDR YQREMFANDV RNLQVVEKGL NKEKGAAGIT EWLPPTNQCQ YILRFHRIMK TYHLKYFTKE EPRALALVAQ CQRG
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