Gene Shewana3_4137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4137 
Symbol 
ID4480354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4969883 
End bp4970266 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content46% 
IMG OID639728755 
ProductATP synthase I chain 
Protein accessionYP_871760 
Protein GI117922568 
COG category[C] Energy production and conversion 
COG ID[COG3312] F0F1-type ATP synthase, subunit I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000292688 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000119081 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGTAAGG TTTTAGCGCG TCGTGGCCGG TGGTCAGCCT ATAAATTGGT GATGATGCAG 
GCGGCGGTGG CTGGGGGTGC TTCAATTCTC TTTTTCGTCG TGTGGGGAGT TCAGTTTGGC
TATTCTGCGT TAGCAGGTGG TTCAATTGCT GTGCTCCCTA ATTTTGTATT CGCGACCCTC
GCTTTCTCTC ATACGGGAGC AAGTTCAGCA GCAAAAGTGA TTAAAACTTT TTACTGGGGG
GAAGCGGTAA AGTTGCTGTT AACCATCGCA ATGTTTTCAT TGGTGTTTAG CAAGCTTGAG
GTGGCATTTT TGCCGCTTTT TGTTTGTTAT GTGCTGACGT TAATAGTGCA TTGGACAGCT
CCTTTATACT TCAAGCAAAG TTAA
 
Protein sequence
MSKVLARRGR WSAYKLVMMQ AAVAGGASIL FFVVWGVQFG YSALAGGSIA VLPNFVFATL 
AFSHTGASSA AKVIKTFYWG EAVKLLLTIA MFSLVFSKLE VAFLPLFVCY VLTLIVHWTA
PLYFKQS