| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4055 |
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| Symbol | |
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| ID | 4480269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4872457 |
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| End bp | 4873953 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728670 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_871678 |
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| Protein GI | 117922486 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCC TCTCTTACGT TTCATTGGCA ATTTACTTTA TTGCCATGCT CGCTATTGGT
TTGTTCGCCT ATCGTAAGTC GACCGATGAT GTCTCTGGCT ACATTTTGGG TGGCCGCCAA
GTGAGCCCGC ACGTCACGGC ACTCTCGGCT GGCGCCTCGG ATATGAGTGG CTGGATGCTG
ATGGGCCTGC CCGGCGCCAT GTTCCTAGTG GGGTTTGAAA CCCTGTATAT CGCCCTCGGA
TTATTAATTG GTGCTCTAAT CAATTATCTG GTAGTCGCCC CTAAATTGCG GGTATACACC
GAGGTCGCCG ATAACGCGCT GACTATTCCT GAGTTCTTCG CTAAACGCTT TGGTCAGGCC
GATAACAGCA TTCGTATTAT TGCCGCCGCC ATCATAGTGA TCTTTTTCAC CCTCTATACC
TCGGCGGGAT TAGTCGCGGG CGGCAAGTTG TTCGAATCCG CCTTTGGGCT GAACTACGAT
ATTGGCCTAG TCGTCACCTT AGCCGTCGTG GTGTCGTACA CTCTGCTGGG GGGATTTTTA
GCCGTTAGCC TCACCGACTT TGTGCAAGGC TGCATTATGT TTGTCGCCTT GGTCTTAGTG
CCTTTCGTGG CATATCAAGA ATTTACCAGC GCAGATCGTA TGATGAACTT TGCCTATCAG
TCGATCCCGC ATTTTACTGA CGCGATGCAA AATGTGACGC TGCTAGGCTT AATCTCCAGC
CTCTCATGGG GACTCGGGTA TTTCGGCCAG CCGCATATTA TTGTGCGTTT TATGGCGATC
CGCTCAGTCG CCGACATTAA AACCGCACGC CGTATCGGCA TCAGTTGGAT GACAGTAACC
ATTATCGGCG CCTTAGCGAC GGGCTTGGTC GGTATCGCCT ACGCCAATAA ATTTGGCATG
AAGCTTTCGG ATCCTGAAAC CATCTTTATC GTGTTTTCAG AGTTACTGTT CCACCCCTTA
ATCAGCGGCT TCCTGCTCGC TGCGATTCTC GCGGCCATTA TGAGCACGAT TTCATCGCAG
CTATTAGTCT CCTCGAGTTC GCTGACCGAA GATATTTATC GCACGCTGTC GAAGAAACAA
GCGAGCGAGC AAGAGATGGT TAAAATGGGG CGTTACGGGG TCGCAGGTGT TGCCATTGTC
GCGACGCTAT TGGCGCTTGA TCGCTCTAAC AGCATCCTCT CCCTTGTGAG TAATGCATGG
GCAGGCTTTG GTGCCGCCTT CGGTCCGCTG GTGCTGTTTA GTTTGTATAA AGCTAACCTC
ACCCATAAAG CGGCGATTGC GGGGATTATT TCGGGCGCGC TCACGGTACT CTTTTGGATT
TACGCCCCCG TGCTTTCCGA TGGTAAGGCA TTGAGTAGCT TAGTGTATGA GATGATCCCC
GGCTTTGTTG TCAGCAGCAC AGTGATTTAT CTGGTGAGCA AATTCGATAA CGACCCGTGC
GCTAAAACCA CTAAGCAATT CCATCAGGCC GGTCGTGTAT TGGCCGAGGA AAGCTAA
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| Protein sequence | MNSLSYVSLA IYFIAMLAIG LFAYRKSTDD VSGYILGGRQ VSPHVTALSA GASDMSGWML
MGLPGAMFLV GFETLYIALG LLIGALINYL VVAPKLRVYT EVADNALTIP EFFAKRFGQA
DNSIRIIAAA IIVIFFTLYT SAGLVAGGKL FESAFGLNYD IGLVVTLAVV VSYTLLGGFL
AVSLTDFVQG CIMFVALVLV PFVAYQEFTS ADRMMNFAYQ SIPHFTDAMQ NVTLLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVADIKTAR RIGISWMTVT IIGALATGLV GIAYANKFGM
KLSDPETIFI VFSELLFHPL ISGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYRTLSKKQ
ASEQEMVKMG RYGVAGVAIV ATLLALDRSN SILSLVSNAW AGFGAAFGPL VLFSLYKANL
THKAAIAGII SGALTVLFWI YAPVLSDGKA LSSLVYEMIP GFVVSSTVIY LVSKFDNDPC
AKTTKQFHQA GRVLAEES
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