| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3960 |
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| Symbol | |
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| ID | 4480174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4758937 |
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| End bp | 4759878 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639728576 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_871584 |
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| Protein GI | 117922392 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC TACATTTTGA TACGCTAGTG TGGCATTGGC CGATCGCGAT TTACCTGTTT
TTAGCTGGCG CATCGGCCGG CGCCATGTTC TTTGCGGTGT TACTCAAACA TTTTGTGTTA
AAGCATAACG CCTACCAGTC TGGCTTTGTA CAAGCGGCCT GTATTGTGGC GCCCGTGGCT
GTGATGGCGG GTTTGGGCAT CTTAGTCTTG GACTTAACTA AGCCCTTCGA TTTTTGGAAG
ATCTTAGTCT TCTATAATCC CAAGTCAGTG ATGTCGATGG GGGTGCTGAT CCTACTGATT
TACCAAGTCT TTATGTTTAT GTGGATTGGC TTGTTATTCC GTAAACCTAT CGATGCTTGG
TGTGAGAGTC GCTTCCCCAT AGTGCTTAAG TTCACCGCTT GGTTGAGCCG TTTCGAGGCA
ACGATTACTG GCTTGTTGGT GATCTTCTCC CTTGCGCTTG GAGCCTATAC CGGCTTTTTG
CTGTCGGCCT TACCCGGCTA TCCGATGTTG AAAAACCCCG TGTTGCCACT GCTGTTTTTG
GCTTCGGGAT TGTCATCGGG CGCCGCATCT TCTCTGCTGG GTGGTGTGCT GCTTAATGCG
AATCCCAATG CCAAGGAAGT GCACTTTATC CACAAGGTTG AGATCCCACT GATTTTGGTA
GAGATAGTGC TGATTTTCAC CTTCTTTATG GGGCTCGTCT TGTCTGGAGG TCAGAGTAAG
TTTGCCGCCT TCAATGCGAT AGGTTATGGC TTCTGGGGAT GGATCTTCTG GATTGGCATT
GTCGGGCTGG GATTGTCTGG CCCATTGGCG ATGAACCTGT TTATGACGGC CACTTCAAAA
CGTAAGTGGG CCTATGTGGC AGGCACAGCA TGCTTAAGCC TCATTGGTGT GCTACTGCTG
CGTAACTTTA TTCTCTACAC GGGGCAAATG ACGGTCGTTT AA
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| Protein sequence | MSALHFDTLV WHWPIAIYLF LAGASAGAMF FAVLLKHFVL KHNAYQSGFV QAACIVAPVA
VMAGLGILVL DLTKPFDFWK ILVFYNPKSV MSMGVLILLI YQVFMFMWIG LLFRKPIDAW
CESRFPIVLK FTAWLSRFEA TITGLLVIFS LALGAYTGFL LSALPGYPML KNPVLPLLFL
ASGLSSGAAS SLLGGVLLNA NPNAKEVHFI HKVEIPLILV EIVLIFTFFM GLVLSGGQSK
FAAFNAIGYG FWGWIFWIGI VGLGLSGPLA MNLFMTATSK RKWAYVAGTA CLSLIGVLLL
RNFILYTGQM TVV
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