| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3931 |
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| Symbol | |
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| ID | 4480145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4725265 |
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| End bp | 4726137 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728547 |
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| Product | patatin |
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| Protein accession | YP_871555 |
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| Protein GI | 117922363 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00834869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.974076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATG TGGCCTTAGT ATTAGAGGGT GGCGGCCTGA GGGCAATTTA TACCGCCGGC
GTGTTAGATG CCTTTTTGCA GCAACAATTG CACTTCCCCT ATGTGATTGG TGTATCGGCG
GGGGCGATTT ATCCCGCTTC TTATGTTTCA CGCCAATTTG GCCGCAATTT ACAAATTCAG
CAGCAATATC TGCGAGATAA ACGCTACATG GGGCTGCGCC ACTGGTTGGC CACGGGTAAT
TATGTCAACA CAGACTTTAC CTATAAGCGC ATGGCCTATG AGTTACTGCC TTTTGATTTT
AAAACCTTTT TAGGTAGCGG AACCGAATTT AAGGTCGGGG CATTTAACTG CCAGACAGGA
CAAACCGATT ACTTTGGCAT GGCCGATTTT CAAGAGCACG ACAAATTGCT CGACGTGCTT
ATCGCCTCCT CTAGCCTGCC TTTTATGGCC AATCCCTATC GGATAAACCA CCAAACCTAC
CTCGACGGTG GCATCGCCGC GCCCATTCCG GTAGCGAAGG CGCAGCAAGA GGGCTATAAG
CGGCAGGTGG TGATCCTGAC TCAGGACGCA AACTATCGAA AATCGCCGAT GAAGTTCAAC
TGGTTAGCGC GCAAGCGTTA TCAAGCTTAT CCGGCAGTGG CCGCCGCGCT CAAAATACGC
CACCAACGTT ATAACCAATC CCTCGAGGAA CTCGCCCAGA GTGTTGCCAG CGGCGATACC
TTTGTGATCC GCCCTGCTGC GCCACTTAAT CTCTCGCGAC TTGACCGCAA TATCGATAAA
GTGACCGCCG TATATCGCCA AGGGCTGGCC GATGGGCAGG CGATTTTGCC CAAGCTGCAG
GCTTGGCTAA ACACTGGGGC AGGTATCAGT TAG
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| Protein sequence | MQDVALVLEG GGLRAIYTAG VLDAFLQQQL HFPYVIGVSA GAIYPASYVS RQFGRNLQIQ
QQYLRDKRYM GLRHWLATGN YVNTDFTYKR MAYELLPFDF KTFLGSGTEF KVGAFNCQTG
QTDYFGMADF QEHDKLLDVL IASSSLPFMA NPYRINHQTY LDGGIAAPIP VAKAQQEGYK
RQVVILTQDA NYRKSPMKFN WLARKRYQAY PAVAAALKIR HQRYNQSLEE LAQSVASGDT
FVIRPAAPLN LSRLDRNIDK VTAVYRQGLA DGQAILPKLQ AWLNTGAGIS
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