| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3899 |
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| Symbol | |
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| ID | 4480110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4677232 |
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| End bp | 4678311 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639728512 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_871523 |
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| Protein GI | 117922331 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00788991 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.338087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCAA ATTTATGGAA GCGTCAGGCT CCGCAAATGG TCGGGATTGA TATTGGTTCC
CATGAAGTAA AGGCTATTCT GCTGAGTAAG ACTGCTGATG GATATAAAAT ACTAAGTCAT
GCAGCGGTTC CCGTAAAAAA GGGGGCTATT AACGATCATG ATATTCGTGA TGCCGATGCC
GTTGTTGAAT GTCTCAAACA GATTAAGCGT ATTTTACCTA AATCGGTTAA ATATGCAGCT
GTTGCGGTCT CAGGTTCTGC GGTGATGACT AAGGTTATCT ACATGGATGC CTCGCTAAGC
GAGGAGGAAA TGGAAGCGCA AATTGAGATT GAAGCCGATA ACCTTATCCC ATACTCCCTC
GATGAAGTTA GCATTGATTT TGAAACTCTA AATGTTAATA GCACCGATCC TTCTAAGGTT
GATGTGCTAC TGAGCGCGTG CCGCACTGAC AATATTGATG CTAGAGTCGA TGCGCTCGAT
GAAGTAGAAC TCGAAACCAA AGTCGTTGAT GTGGAAGGTT ATGCTCTGGG CCGAGCCGTT
GAGTTGGTGC TAGGGCAGTT ACCCGAAGGC GCTCGTCAGA AGGCGGTGGC CATGGTCGAT
ATTGGCGCCA ACATGACGAC CTTCTGCGTG GTGGAGTCGG GTGAAACGAC CTTTATTCGT
GAGCAGGCCT TTGGTGGCGA GTTATTTACG CAGTCGATTC TGTCGTTTTA TGGCATGTCC
TACGAACAAG CAGAGAAAGC CAAAATTGAA GGCGATTTGC CACGTAATTA TATGTTCGAA
GTGCTATCTC CCTTCCAAAC GCAATTACTG CAACAAATTA AGCGAACGCT GCAAATTTAT
TGTACGTCGA GCGGCAAAGA TAAAGTCGAT TATCTCGTAT TATGCGGTGG AACATCTAAA
CTGGAAGGCA TGGCTAACTT ATTAACGAAT GAGTTAGGCG TCCACACCAT TATTGCCGAT
CCTTTCCAAG GGTGTCTGCA CGCAGATGAA TCCGTTAAAA ATATACTGCA ACCTAGCATT
AGCAAATATA TGGTTGCTTG TGGTTTAGCG CTGAGGAGCT ACGGTCAATG GCGAACATAA
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| Protein sequence | MLSNLWKRQA PQMVGIDIGS HEVKAILLSK TADGYKILSH AAVPVKKGAI NDHDIRDADA
VVECLKQIKR ILPKSVKYAA VAVSGSAVMT KVIYMDASLS EEEMEAQIEI EADNLIPYSL
DEVSIDFETL NVNSTDPSKV DVLLSACRTD NIDARVDALD EVELETKVVD VEGYALGRAV
ELVLGQLPEG ARQKAVAMVD IGANMTTFCV VESGETTFIR EQAFGGELFT QSILSFYGMS
YEQAEKAKIE GDLPRNYMFE VLSPFQTQLL QQIKRTLQIY CTSSGKDKVD YLVLCGGTSK
LEGMANLLTN ELGVHTIIAD PFQGCLHADE SVKNILQPSI SKYMVACGLA LRSYGQWRT
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