| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3868 |
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| Symbol | |
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| ID | 4480078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4644760 |
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| End bp | 4645518 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639728481 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_871492 |
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| Protein GI | 117922300 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0359571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA TGTTTGAATA CGACTCTAAA CTGGCGCAGT CACTTTCGCG GGTGCCAGTG
CATCAGCCTT CGATTATCCG CGTGATCCAA GGCGAGAAGT CGCTGCTCTG GCAAGATGAT
GCCCTCGCCG TGAATGCTGA GCAGCTATTA TTGCTACCCG CCGGAAGCCA TATTAGCTTC
GTCAATCGGC CGATGAGTGG ACGCTACCGA GCGGTGCAAC TCCTCTTGCC CTATGAGTTG
CCCTCGGGCG TTATGCTGGC GGCGACCGAC AGGCAGATAC CTAAACCCAC GCAAACGATT
TCACGCTCGG TCGATTTTGC CTGGAATGCG TTATTGCACA GCCTGACCTT AGCCCTACCC
ACATCGGTGC AGATGCATTA TTTAGCCGCC TTGCTGCTCA GTCTGCCGCA GCAAGCGAGC
GTCAATTGGC TCTACAGTCA TAAACCTGCG AATGTGAGTC AAGCTGTGCT GGGCTTATTG
GGGCAACATC CTTCAGCCCC ATGGCAGCAA GAGGACATCG CCGATAAGTT GCATATGAGC
AGTGCCAGTT TAAGACGTAA ACTGGCGCAG GAAGACACTA GTTTTAGGCA ATTGCTCGCC
GAAGTGCGTT TGTGTCAGGG CTTAACCCTG TTGCAAAACT CTACGGATTC CGTGCTGCAA
ATCGCATTGG CCTGCGGCTA TTTATCGGCA GAAAAATTCT CGGCACGCTT TAAACAGGCC
TTTGGCCTGA CACCCGCCGC GTATCGCCGT ACACTGTGA
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| Protein sequence | MIRMFEYDSK LAQSLSRVPV HQPSIIRVIQ GEKSLLWQDD ALAVNAEQLL LLPAGSHISF
VNRPMSGRYR AVQLLLPYEL PSGVMLAATD RQIPKPTQTI SRSVDFAWNA LLHSLTLALP
TSVQMHYLAA LLLSLPQQAS VNWLYSHKPA NVSQAVLGLL GQHPSAPWQQ EDIADKLHMS
SASLRRKLAQ EDTSFRQLLA EVRLCQGLTL LQNSTDSVLQ IALACGYLSA EKFSARFKQA
FGLTPAAYRR TL
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