Gene Shewana3_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3853 
Symbol 
ID4480063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4627192 
End bp4628241 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content41% 
IMG OID639728466 
ProductCRISPR-associated Csy3 family protein 
Protein accessionYP_871477 
Protein GI117922285 
COG category 
COG ID 
TIGRFAM ID[TIGR02566] CRISPR-associated protein, Csy3 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTAT GCAATGTTTT AAAGTATGAC CGATCCCTCT ACCCAAGTAA GGCGGTATTT 
TTCTATAAAA CAGCCGATTC TGATTTTGTT CCTCTTGAAG CTGAAATCAC TCGTATACGT
GGTCAAAAAG CTGGATTCAC TGAAGCATTT ACTCCTCAAT TTAAATCGAA AAACTTAGCC
CCCCAGGACC TTACACACTG TAATCCTCTA ACGATTGAAG AGTGTTATGT TCCGCCAAAT
GTAGATCACA TCTATTGCCG CTTCTCGCTA AGAGTACAAG CTAACTCGCT CAAACCCTCT
GGCTGCAGCG ATTCTGAGGT TTCTAGTTTG CTTGAAAAGT TGTCCGCAGC ATTTAAGGAG
TGCGACGGTT ACCAAGAGCT GGCGACCCGT TTTTGTAAAA ATCTACTGTT AGGAACTTGG
CTCTGGCGTA ATCAAAACTC TGGTAACACT CAAATAGATA TTAAAACCAG TACGGGAAAG
TGTTATCAAA TCAGTAATAC GAGGCAGTTA GCTTGGAATA TTTGGTCTGA TGAAGCCCGG
ACTGTTCTTG GTGAATTAAG TAAAGAGATG CACTTAGCTT TGACTGATCC GAATGTATTT
TGGAACGCCG ATATTACAGC AAAAATTGAG ACTGTCTTTT GCCAAGAGAT CTACCCAAGC
CAAACCTTTG GTGAAAAGTC TGCAGAAGGT GAAACTTCGA AACAGTTTAC TAAGGTTAAA
TGTACTGATG GTCGTTATGC GGTGAGTTTT AATTCGGTCA AGATTGGTGC AGCTATTCAA
TCAATTGATA ATTGGTGGGA TCAGGACGAT GTTAAACGAT TACGAGTACA TGAGTACGGT
GCAGATAAAG AGCTGGGTAT CGCACGACGC TCACCTGAAT CTGCACTGAG TTTTTATACC
TTATTTGTAA ATACAGAGCT GTATTTAGCT GAACTCAATC AACAGGCAGC AGAGCCAGGG
CATTCAATTC ATCCTAATAT TTACTATCTT TTTGCTGTCC TGATAAAGGG TGGCATGTTC
CAGAAGAAAG CCGAAACGAA GAAGGCATAA
 
Protein sequence
MELCNVLKYD RSLYPSKAVF FYKTADSDFV PLEAEITRIR GQKAGFTEAF TPQFKSKNLA 
PQDLTHCNPL TIEECYVPPN VDHIYCRFSL RVQANSLKPS GCSDSEVSSL LEKLSAAFKE
CDGYQELATR FCKNLLLGTW LWRNQNSGNT QIDIKTSTGK CYQISNTRQL AWNIWSDEAR
TVLGELSKEM HLALTDPNVF WNADITAKIE TVFCQEIYPS QTFGEKSAEG ETSKQFTKVK
CTDGRYAVSF NSVKIGAAIQ SIDNWWDQDD VKRLRVHEYG ADKELGIARR SPESALSFYT
LFVNTELYLA ELNQQAAEPG HSIHPNIYYL FAVLIKGGMF QKKAETKKA