| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3798 |
|---|
| Symbol | |
|---|
| ID | 4480008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4563754 |
|---|
| End bp | 4564215 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639728411 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871422 |
|---|
| Protein GI | 117922230 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000122889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGA TGGTACTTAT CGCACTGCTT AATGGCGGTT TAATTGCCTT AAGCCGAACC
TTTAATGGTG CCTTGGCAAA ACATAGCCAT GCGTTAATCG CATCTTGCTG TAATCATATT
GTGGGCTTTG TAGTCTTGAG TGCATGGATA ATCTGCCTAG AGAGTGGCGC AAATCAGCTA
CAAGGTCAGC CGCCAGTGTA TTTGTACCTT GGTGGAGTCA TTGGCGCTTT ATTTGTCGTG
CTAAATAGTT GGGCATTGCC ATCGTTAGGG GTGATGCGTT GTACATTGCT CGTAATATGT
GGGCAGATGC TGACAGGCGT TGTGCTGGAT ATAATATCTA GCGCCAGCGG TATGCATTGG
GCGTCGCTCG TTGGAGTATG TTTGATGTTA GCGGGTGTCG TGTTCCTTAA TCGGGTGAAA
CAACCTACGC CGCAGGTAAA GCACGCGAAT TGCTCATTGT GA
|
|---|
| Protein sequence | MELMVLIALL NGGLIALSRT FNGALAKHSH ALIASCCNHI VGFVVLSAWI ICLESGANQL
QGQPPVYLYL GGVIGALFVV LNSWALPSLG VMRCTLLVIC GQMLTGVVLD IISSASGMHW
ASLVGVCLML AGVVFLNRVK QPTPQVKHAN CSL
|
|---|
| |