Gene Shewana3_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3787 
Symbol 
ID4479997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4547669 
End bp4549096 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content39% 
IMG OID639728400 
Producthypothetical protein 
Protein accessionYP_871411 
Protein GI117922219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TCCTAAGCGA TGAAGCTTAT AAAAAAAATA TAAAAATTAT GGATAGCCTG 
ACGCTTGAGC AAAAATCTAT AGCTAGAAAA GCAGGTACAG GTAATCCTCT CTTTGAAGCT
GCGTGGAAAA AGCTACATAC ACTTCTGCAA CAAAATCGTT TTAAAGACTT CAATATTGAA
GATAGATTCG ATATTAGAGC TCTCTCCGTT GCACTAACTG GAGATATGAA ACTACGCCAT
GGAATAGATA TAAGTAGTGC TCTGCTCATC AAAGTTTCAA AGATAATTCC TCATGGCAGC
AACCTATTCA TAGAATCTCT CCTCCAGTTT TTCCTTAGCG ACTTTAACTT AATAAAAGAC
CCAAATGCTG TTGGAGCTTG GCTATCTCAG GAGCGTCAGA GAAAAGGGTT AAATAAAGGT
CTAGAAGTTA AGATTTTTTG TAGTGATGGC CCCACCTTTT TCGCACAGCA AGCGATTAAG
AGAAACATAA ACTTTGAAGC GCAGGTACAT AGTTGGGGGC TGGACGCATA CGCATCAGGT
GATTTTATAA AGCAGGCAAA ATCAATTTAT TTTGTTGAAC AATTACAAAA AATCCCTGTG
AATGAACCTC ATAAATTATT GGAAGAGGTC AGCAAGCAAG TCATTGCTGA AGGTCGTTAC
GATGCAGATG ATCTTGTAGG ACATGTCGCG CTAAGAATTT TGATAGATAG AGCCCCTAGC
AAAAATGTAC ATGACAGTTG GAGGGATGCT GTTATTGCCA TAGCAGGAGA TCCCAGAGTA
CCAAGATCAC ATGCACGCTA TATAAAGTGG TGGAGCCAGC TTACCTCTCA GCAGATAAAA
AAAGTCCAAG GATGGTTATC CAAACTGGAT CTTAAGCTCT TTTTAGAAGC TCTCGAGGAC
TATTCGATAA GTTCTCGAGA TGATGCCATG ATGCGTATGT TTCCATCTCG CAAACACTTT
TTAGAAGGAC TGCATGAATC TGGTGCTATT GTTCATACAA AATTATATTT ATCAAAAAAA
GCATTATTCT ACGTAAAACG ACACTATAAA GCTGAACATA TACCAGAATA TTCTATTGTT
GAAGATGGTG ATATTTCCGT TATCTATGCA GAGCTTTCAA ACGGTCACAT GGTCGAGGGA
AGCCATAACT GTCAAATTTG GTTCTATAAA AAGCTACATG AGTCTGCTCC TGTCTTACAA
TTTGATAAGC AGAAAAAGAC CTACCGCTCA TTGACTCTTG GTCTTAACGA GCAAATGTAT
CGATATGGCT GTGAAGCATC CGACCACTTC TCTCACTCGC CAGCTAATTT CAGCTGGCAA
CGACGCGCCT TAGAAGCCTT AAACAAAATG GGATTAAAGA TCAGAGCGTC TGATGTATTA
AGTGGAACTG ACTATAACCA ATATAAAAGG CTCTACGGAG TAAGTTAA
 
Protein sequence
MKFFLSDEAY KKNIKIMDSL TLEQKSIARK AGTGNPLFEA AWKKLHTLLQ QNRFKDFNIE 
DRFDIRALSV ALTGDMKLRH GIDISSALLI KVSKIIPHGS NLFIESLLQF FLSDFNLIKD
PNAVGAWLSQ ERQRKGLNKG LEVKIFCSDG PTFFAQQAIK RNINFEAQVH SWGLDAYASG
DFIKQAKSIY FVEQLQKIPV NEPHKLLEEV SKQVIAEGRY DADDLVGHVA LRILIDRAPS
KNVHDSWRDA VIAIAGDPRV PRSHARYIKW WSQLTSQQIK KVQGWLSKLD LKLFLEALED
YSISSRDDAM MRMFPSRKHF LEGLHESGAI VHTKLYLSKK ALFYVKRHYK AEHIPEYSIV
EDGDISVIYA ELSNGHMVEG SHNCQIWFYK KLHESAPVLQ FDKQKKTYRS LTLGLNEQMY
RYGCEASDHF SHSPANFSWQ RRALEALNKM GLKIRASDVL SGTDYNQYKR LYGVS