| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3712 |
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| Symbol | |
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| ID | 4479913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4454090 |
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| End bp | 4455007 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639728316 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_871336 |
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| Protein GI | 117922144 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAA CCGCCCGTGC CGCCCAACCT TCTTTTGTGG TTCTTCCCTT AGATGTGGTT
GATAAACCAA CCGTATTTTC TTTTTTGATC GAGCATTATG CCCATATTGG CGAAGCGGTT
TGGCGCCAGC GGATCCTCGA TGGCAAAGTG CATTGGCAAG ACGGCAGCTT AATTGGATTA
GATACAGCCT ATCGGCCGAC GGCGAGGGCT TATTACTACC GTGAAGTCCC CGTCGAAACA
CAAGTCCCCT TCGAGTCGCC GATTTTGTTT CAAGATGACA ATCTTATCTT GGCCTACAAA
CCGCATTTTT TACCCGTTAC CCCCAGCGGC GATTATGTGA ATGAATGCCT AGTACACAGG
TTACGCTTAA GCACTGGGAT AGACACTATC GCTCCAGCCC ATAGATTAGA CCGGGAAACC
GCAGGCGTGA TCCTGATGAC GACTCGCCCA GAGACGCGGC ATATTTATCA TCAGCTATTT
ATCGATGATG CGATCCGTAA AGATTATCAA GCGATAGCCA AACTCACCCC AGAGATTATG
GCGCAATATG CCAGTGGCGA ATTAACCTTG CCATTGCATT GGACGGTGAA AAATCGCATG
CAACGCAGCG AGCCGAGTTT CACCATGAAG ATAGTCGAAG GTGAGGCAAA TACGCACTCT
GAAATCAGCT TAGTGGCGAT TCATGGGGAG TTGGGTTTAT TCGAGTTAAG CCCTATTACG
GGTAAGACGC ACCAGCTGCG GGTCCATATG CAAAGCCTTG GTATGCCATT GTTAAATGAC
CGCTTTTATC CGACCTTATA CCCTAAAGGA CCGGATGATT TTAGCAAGCC GTTACAGCTC
TTGGCGCAGC GATTACGTTT TATCGATCCT ATCAGTGGTC GTTCGCACGA TATTGAATGT
GATGGATTAA CGTTTTAG
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| Protein sequence | MTQTARAAQP SFVVLPLDVV DKPTVFSFLI EHYAHIGEAV WRQRILDGKV HWQDGSLIGL
DTAYRPTARA YYYREVPVET QVPFESPILF QDDNLILAYK PHFLPVTPSG DYVNECLVHR
LRLSTGIDTI APAHRLDRET AGVILMTTRP ETRHIYHQLF IDDAIRKDYQ AIAKLTPEIM
AQYASGELTL PLHWTVKNRM QRSEPSFTMK IVEGEANTHS EISLVAIHGE LGLFELSPIT
GKTHQLRVHM QSLGMPLLND RFYPTLYPKG PDDFSKPLQL LAQRLRFIDP ISGRSHDIEC
DGLTF
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