Gene Shewana3_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3617 
Symbol 
ID4476217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4343480 
End bp4344424 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content52% 
IMG OID639728225 
Productpolysulphide reductase, NrfD 
Protein accessionYP_871245 
Protein GI117922053 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3301] Formate-dependent nitrite reductase, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA CTTGGGGCGA TATGGCGCAA TATGATCCCG TCACTTGGCA TTGGATCATC 
GCCGTGTATC TGTTTATGGC GGGCTTATCC GCCGGAAGTT TGCTGATTGG TATCGGTTTG
CGTTGGTTTA ATAAGGAGCA AGCGCAGGGG GAGACCAGTA TTCTCAAGGC CGCCGCCATT
ATTGGCCCTG TGGCCATTTG CCTAGGCTTG GCATGTTTAG TGTTTGATTT AACGAAGCCT
TTCCACTTCT GGCTGATTTT AATCAACTAT AACTTCCAGT CCGTTATGGC GATTGGGGTA
TTAGCGCTAC TGGCTTACTC ACCCTTGGCA TTTGCCTACG CGATTCTTGT GCTGCGTGAC
GAACTGCCAA AGTGGGGCTT AGGTTTTTTA GTGCCTATCG CTAAGCTGCT GATGCCCTTT
AGAAAGCTGA TTGAAGTGCT GCTGTTTATC CTCGCGATTG GTGTAGGCGC TTACACAGGC
TTCTTAATTT CGGCCATGAA TGCCTATCCA ATGCTGAACA CTGCGGTATT GCCGGCGCTG
TTCTTAGTCT CTGGTTTATC GGCTGGCGCT GCCGCCAATG CGGTGCTGGC GCTGGTGATG
TTCAAGACCG ATAGCCACGA CAAGACCTTA GCCAAAATGC ATGGCTTAGA GCTGCCAGTG
ATGGCCATCG AAATCATGTT CCTGTTTATG TTGTTCTGCG CCTTGTACTT TAAGGGCGGC
GCGGCGGCTG CGGCGCTGGC ATCACTCACC TCTGGCGTGT GGGCAAGCGT ATTCTGGATT
GGCGTGGTCG GGATTGGTTT TGGTATTCCT TTGCTGTTTA TGCTGTTGCC TGCCGCGACT
CGCCATAGCA AGGGCGCGAT GATCATGGTG GCCTGCGCCA GCTTAACCGG CGTGTTAGCA
CTGAGACACT TTATTGTGTA TGCGGGGCAA AGCTATCTAA GTTAG
 
Protein sequence
MNNTWGDMAQ YDPVTWHWII AVYLFMAGLS AGSLLIGIGL RWFNKEQAQG ETSILKAAAI 
IGPVAICLGL ACLVFDLTKP FHFWLILINY NFQSVMAIGV LALLAYSPLA FAYAILVLRD
ELPKWGLGFL VPIAKLLMPF RKLIEVLLFI LAIGVGAYTG FLISAMNAYP MLNTAVLPAL
FLVSGLSAGA AANAVLALVM FKTDSHDKTL AKMHGLELPV MAIEIMFLFM LFCALYFKGG
AAAAALASLT SGVWASVFWI GVVGIGFGIP LLFMLLPAAT RHSKGAMIMV ACASLTGVLA
LRHFIVYAGQ SYLS