| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3571 |
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| Symbol | |
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| ID | 4476171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4283246 |
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| End bp | 4284328 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728179 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_871199 |
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| Protein GI | 117922007 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.239658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.276589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT ATCGACTGCT CCCCTTGGCG GCTTTGTTGC CTGCCCTACT GACGGCCTGT
ACACCCGCGG AAAGCTCAGT ACAGGCGAGT GCTATTCGTC CGGTAAAACT CTTTGAGGTG
ATGCAACTCG AAGGGGGAGA TTTTAGGACA TTTCCGGCCC GCGTCAGTGC CAATAGCCGC
GCCGAGTTAT CCTTTAGGAT TTCAGGCGAG CTGACAGATC TCGCATTAGT GGAAGGGCAA
CAGATCCGCC AAGGCAGCCT CTTGGCTAAG CTCGACGACA GGGATGCCTA TAACAATTTA
ATGACCCGCG AAGCCGAGCA TGAACTCTTG GCGGCGGATT TTCAGCGTAA AACCGAACTC
CTCAAGCGCA AGTTAATCTC CCAAGCCGAG TTTGATAGCG CCCAAGCGCA GCTTAAATCG
GCCAAAGCGG CCTTGGCCGC CGCCCGTGAT CAGTTAAGTT ATACCAAGCT TATTGCTCCC
TTTAGTGGCA CTGTGGCCAA ACGTTTAGTG GATAACCACC AAATCGTACA GGCCAACCAA
GGGATTTTAA CGCTGCAAAA CAACAGCTTG CTCGATGTTA GCATTCAAGT TCCCGAGGCG
ATGGCGGCAA GCTTAAACAA CTATATTCAG CAGCAAAACT TTACCGCTAA GGTGCGTTTT
AGCGCATTAG CAGGGATGGA GTTTGATGCG AAATTCAAAG AATACTCGAC CCAAGTGACC
CCGGGTACTC AGGCCTATGA AGTGGTGTTT TCCTTACCTC AACCTAAAGA TATTCAATTA
CTTCCGGGCA TGAGCGCCGA GTTAACCCTC GCCTTAGTGA AAACCCCAGA TCAAACCGCA
TCGGCCATAG TGCCAGTCAC CGCCATCGAT AAACGCGATC AGGATGGCCA AGTTCAAGTC
TGGGTCTATC AAGCGCAATC GGGCGAAGTT AAACCCACGG CAGTGACCTT AGGCCGAGTC
ACCACCGAAG GCATTGAAGT CTTAGGCGGC ATCAACAAAG GTGACTTGAT TGTCAGCGCG
GGGGTATCCC AATTATCCGA CGGAATGAAA GTGAAGCCAC TACGCTGGCA ACGCGGAGTG
TAA
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| Protein sequence | MKSYRLLPLA ALLPALLTAC TPAESSVQAS AIRPVKLFEV MQLEGGDFRT FPARVSANSR
AELSFRISGE LTDLALVEGQ QIRQGSLLAK LDDRDAYNNL MTREAEHELL AADFQRKTEL
LKRKLISQAE FDSAQAQLKS AKAALAAARD QLSYTKLIAP FSGTVAKRLV DNHQIVQANQ
GILTLQNNSL LDVSIQVPEA MAASLNNYIQ QQNFTAKVRF SALAGMEFDA KFKEYSTQVT
PGTQAYEVVF SLPQPKDIQL LPGMSAELTL ALVKTPDQTA SAIVPVTAID KRDQDGQVQV
WVYQAQSGEV KPTAVTLGRV TTEGIEVLGG INKGDLIVSA GVSQLSDGMK VKPLRWQRGV
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